| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1373 |
|---|
| Symbol | |
|---|
| ID | 3917827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1419771 |
|---|
| End bp | 1420481 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640444115 |
|---|
| Product | undecaprenyl pyrophosphate synthetase |
|---|
| Protein accession | YP_496651 |
|---|
| Protein GI | 87199394 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0884424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCAG TCCCCGCCTC GACCGGCGGC ACCGCGCCGC ATGGCGCGCG GCATGTTGCC
ATCATCATGG ATGGCAATGG TCGCTGGGCG AAGAAGCGCA TGATGCCGCG GGCCTTCGGG
CACAAGCGCG GGGTCGATAC TGTGCGCGAG ATTGCCCGCG CTGCCCGCGA CATGGGGCTC
GAGGCGCTCA CGCTCTACGC CTTCTCGTCG GAGAACTGGA AGCGGCCCGC CGACGAGATC
GCGGACCTGA TGGGGCTCTT GCGCACCTTC ATCCGCAATG ATCTGGACGA GTTCGTCGCG
AACAATACTC GGCTACGCAT CATCGGTGAT TATCAGGCAC TTGCCCCTGA TATTGTCCAG
ATGATCGAGG ATGCCATGGC GCGTACGGCG GGCAATACGG GCACGACCCT GGCCATTGCG
CTCAATTATG GGTCGCAGCA GGAAATCGCC CGTGCCGCCG CTCGCGCGGC CGAGAAGGGT
GCGATCACGC CCGAGGCGAT CGAGGCCGAA CTCGATACGG CCTGCCTGCC GCCTCTGGAC
CTGCTGATCC GGACCTCGGG AGAGATCCGC CTGTCGAACT TCCTGCTGTG GCAGGCGGCC
TATGCCGAAA TGTGGTTTAC AGACGTGCTC TGGCCCGATT TCACTGCGGC CCACCTGCGC
GACGCGCTTG ACCAGTTCAC ATCGCGAGAG AGGCGCTTCG GTGGACGTTG A
|
|---|
| Protein sequence | MTAVPASTGG TAPHGARHVA IIMDGNGRWA KKRMMPRAFG HKRGVDTVRE IARAARDMGL
EALTLYAFSS ENWKRPADEI ADLMGLLRTF IRNDLDEFVA NNTRLRIIGD YQALAPDIVQ
MIEDAMARTA GNTGTTLAIA LNYGSQQEIA RAAARAAEKG AITPEAIEAE LDTACLPPLD
LLIRTSGEIR LSNFLLWQAA YAEMWFTDVL WPDFTAAHLR DALDQFTSRE RRFGGR
|
|---|
| |