| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1337 |
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| Symbol | |
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| ID | 3917787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1377746 |
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| End bp | 1378963 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640444075 |
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| Product | ribonuclease D |
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| Protein accession | YP_496615 |
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| Protein GI | 87199358 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.118451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAC ATCCCCTCAT CACTACGACC GAAGCCCTCG CCGACCTTTG CGAGCGACTT
GCGAAAGCCG ATTTCGTCAC CGTCGACACC GAATTCATGC GCGAGAACAC CTATTGGCCG
GAACTGTGCC TGGTGCAGAT CGCGGACGAC AAGGAAGCCG CCGCGATCGA TCCGCTGGCG
CCGGGCCTCG ACATGTCCCC CCTGCTCGAC CTGCTGGTCG ACAACGAGGA CGTGCTCAAG
GTCTTCCACG CCGGGGGGCA GGACGTGGAG ATAATCTACA ACCTGACCGG CAAGACCCCG
CACCCGATCT TCGACACGCA GATCGCGATG ATGGCGGTCA GCCAGTCCGA ACAGATCGGC
TATTCCAACC TAGTCGAGTC ATGGCTCGGC CTGTCGATCG ACAAGGGCGC CCGCTTCACC
GACTGGTCGC GTCGCCCCCT GACCGAACGC CAGATCGAAT ACGCCATCGG CGACGTCACT
CACCTTTCGA AGATCTTCCC CAAGCTGCTC AAGCGCCTGA TCAAGACAGG CCGCGGCGAA
TGGCTCGACA TCGAGATGGA AAAGCTGGCC GATCCGGAGA ACTACCGGAC CGACATGGAC
ACCGTCTGGC AGAAGATCCG CGCCCCCAGC CGCAACCCCG CCGTTCTCGG CCGGCTCAAG
TCGCTCGCCG CCTGGCGCGA ACGCGAGGCG ATGGACAAGA ACATTCCCAA GGGCCGCATC
ATGCGCGACG AGACGCTGGC CGACATCGCC AGCCATCCCC CGCGCGAACA GCATGACCTT
GCAAAGGTGC GCGGCCTTTC CGCTGGCTGG AAGGACAACG ACATCGGCCG CCGCCTTATG
CAGACGCTTG CCGATTCGAA GCCGCTGACC GACGCCGAAA TGCCGCCCAA GGCTCCGCGC
GGCGCCCCGC TCGGCAAGGA AGGCGCGCTG GTGGCCGACC TGCTGAAGCT GCTGCTCAAG
ATCCGCAGCC GCGAGATCGA CATCGCCGCC CGCCTCCTCG CCCGCACCGA CGACCTCGAA
CTGCTGGCCG CCGGACAACG CAGGAACCTG CCGATCCTCG AAGGCTGGCG CTTCGAACAG
TTTGGCCGCG ACGCGCTAGA ACTGGTCGAG GGCAAGCTCG CCTTCGCGGT CGTGAACGGC
AAGCTCAAGA TGGCGCACAT CGATGACATC GGCGGTTCGT CGGAAGAACC CGAAGTCGTC
GTCCACGTGG ATGAATAA
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| Protein sequence | MKIHPLITTT EALADLCERL AKADFVTVDT EFMRENTYWP ELCLVQIADD KEAAAIDPLA
PGLDMSPLLD LLVDNEDVLK VFHAGGQDVE IIYNLTGKTP HPIFDTQIAM MAVSQSEQIG
YSNLVESWLG LSIDKGARFT DWSRRPLTER QIEYAIGDVT HLSKIFPKLL KRLIKTGRGE
WLDIEMEKLA DPENYRTDMD TVWQKIRAPS RNPAVLGRLK SLAAWREREA MDKNIPKGRI
MRDETLADIA SHPPREQHDL AKVRGLSAGW KDNDIGRRLM QTLADSKPLT DAEMPPKAPR
GAPLGKEGAL VADLLKLLLK IRSREIDIAA RLLARTDDLE LLAAGQRRNL PILEGWRFEQ
FGRDALELVE GKLAFAVVNG KLKMAHIDDI GGSSEEPEVV VHVDE
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