Gene Saro_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1330 
Symbol 
ID3917780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1372662 
End bp1373597 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content66% 
IMG OID640444068 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_496608 
Protein GI87199351 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000246979 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTCG AAACCCTGCC GGTGATCTCG CTCGCCGGCG AACCTGATGC GCTTTCCCGC 
GAACTGGGAG AATCCTTCAG GACCTTCGGC TTCGCCATGG TCCGCGACCA CGGCATCGAC
CCCGACCTCA TCGCCCGCGC CTGGGACCTG ACCGCCCAAT TCTTCGCCCT GCCCGAAGCC
GAGAAGCGCA GCTATTACCT TGATGGCCTT GCCGGCGCGC GGGGCTACAC GCCGTTCGGC
ACGGAGATCG CCAAGGGAGC AAGGCTCCAC GATCTCAAGG AGTTCTGGCA CGTAGGGCGC
GACCTGCCGG CCGGACATCC GCTGTCTGCC TCGATGCCGC CCAACGTGTG GCCCGCGCGC
CCCGAAGGCT TCCGCCAGAC GTTCGAGACG CTCTACGGCG AATTCGACAA GGTCGGCGCA
CGCATCCTCT CGCGCATCGC GGTCTGGCTC GGGCTGGACG AGAACTGGTT CGACCCGGCG
ATCGAGGACG GCAACTCGGT CATGCGCCTG CTCCACTACC CTCCCGTCCC CGATGCCGAA
TCCGGCGCCA TCCGCGCCGG CGCGCACGAG GACATCAACC TCATCACACT TCTCCTCGGC
GCCGAGGAAG CGGGTCTGGA ACTGCTCAGC AGGCAGGGCG AATGGATTGG CGTTTCCCCG
CCCGAGGGCG CGCTGGTGGT CAACATCGGC GACATGCTCC AGCGGCTCAC CAACCACGTC
CTTCCATCCA CCACGCACCG CGTGCGCAAT CCGGAAGGGG AGCGGGCGCG GTTCAGCCGC
TACTCGATGC CGTTCTTCCT GCACCTGAGA AGCGATTTCC CGTTCGTGAC GCTGCCGCAG
TGCATCTCGG ACGAGAATCC CGACCGCTAC CCGGTCTCGA TCACCGCTGA CGATTACCTG
CAGGAACGCC TGCGCGAGAT CGGCCTGCGC AAGTAA
 
Protein sequence
MPLETLPVIS LAGEPDALSR ELGESFRTFG FAMVRDHGID PDLIARAWDL TAQFFALPEA 
EKRSYYLDGL AGARGYTPFG TEIAKGARLH DLKEFWHVGR DLPAGHPLSA SMPPNVWPAR
PEGFRQTFET LYGEFDKVGA RILSRIAVWL GLDENWFDPA IEDGNSVMRL LHYPPVPDAE
SGAIRAGAHE DINLITLLLG AEEAGLELLS RQGEWIGVSP PEGALVVNIG DMLQRLTNHV
LPSTTHRVRN PEGERARFSR YSMPFFLHLR SDFPFVTLPQ CISDENPDRY PVSITADDYL
QERLREIGLR K