| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1326 |
|---|
| Symbol | |
|---|
| ID | 3917775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 1369010 |
|---|
| End bp | 1370335 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640444063 |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_496604 |
|---|
| Protein GI | 87199347 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCTC GCCGCTTCAC CGCCAATGGC CCGCTCAAGG GCCGCATCGG CGTGCCCGGC
GACAAGTCGA TCAGCCACCG CTCGATCATG CTCGGCGCGC TGGCAGTGGG CGAGACGCGC
GTGACCGGCC TGCTCGAAGG CGAGGACGTC CTTTCCACCG CCGCCGCGAT GCGCGCGATG
GGCGCGACGA TCGAACGCGA CGCGGACGGC ATGTGGCACG TTCACGGCGT TGGCGTGGGC
GGCCTGCTCC AGCCGCAACA GGCGCTGGAC ATGGGCAATT CGGGCACGTC GACCCGCCTG
CTGATGGGCC TTGTCGCAAC CCACCCGATC ACGGCGACGT TCGTGGGCGA TGCTTCGCTG
TCGAAGCGCC CGATGGGCCG CGTGATCGAT CCGCTCTCGA CGATGGGCGC CGAGTTCACC
GCATCGCCGG GTGGCCGCCT GCCCCTTACC CTGCGCGGAA TTTCACCTGC CGTGCCAATC
GAATACCGCC TCCCCGTCGC ATCGGCGCAG GTGAAGAGCG CGGTCCTGCT CGCGGGCCTC
AACACGCCCG GCGTGACCAC GGTAATCGAA CCGATCCCCA CCCGCGACCA TTCCGAACGC
ATGCTGCGCG GCTTCGGCGC GGAGCTGACC GTCGATGTCG CCGCCGATGG CGCGCGCGTC
ATCAGGGTGC GCGGCGAGGC CGAACTCAAG CCGCAGGACA TCGCCGTCCC CGGCGACCCG
TCATCCGCCG CGTTCTTCGT GGTGGCGGCG CTGCTGGTCG AAGGCTCGGA CCTCGTCGTC
GAGAACGTCG GCCTCAACCC CACCCGCGCC GCGCTGTTCG ACGTGCTGCG CCTGATGGGC
GGCTCCATCG AGGAGCTGAA CCGGCGCGAA GTGGGCGGCG AACCGGTGGC GGACCTGCGC
GTGCGCCACT CGCTGCTGAC CGGCATCGAT GTCGATCCCG CCGTAGTGCC GAGCATGGTC
GACGAATTCC CGGTGCTGTT CGTCGCCGCC GCCCTTGCCA AGGGCCGCAC GGTGACGACC
GGCCTCGAGG AACTGCGCGT GAAGGAAAGC GACCGCATCA GCGCGATGCG CGCCGCGCTC
GAACTGGCAG GCGCGACCGT CACCGAGACC GAGGACGGCC TGATCATCGA CGGCACCGGC
GGCGACCCCC TGCCCGGCAC CGCAGAGGGC GCGAGCGTCG TCACGCACCT CGACCACCGC
ATCGCGATGA GCATGGCGAT TGCCGGCATC GCCAGCCGCA ACGGCGTGGA AGTGGATGAC
ACCCGCCCCA TCGCCACCAG CTTCCCGGTG TTCGAGAGCC TGCTGGAAAG CGCGACCAGG
CCGTGA
|
|---|
| Protein sequence | MRPRRFTANG PLKGRIGVPG DKSISHRSIM LGALAVGETR VTGLLEGEDV LSTAAAMRAM
GATIERDADG MWHVHGVGVG GLLQPQQALD MGNSGTSTRL LMGLVATHPI TATFVGDASL
SKRPMGRVID PLSTMGAEFT ASPGGRLPLT LRGISPAVPI EYRLPVASAQ VKSAVLLAGL
NTPGVTTVIE PIPTRDHSER MLRGFGAELT VDVAADGARV IRVRGEAELK PQDIAVPGDP
SSAAFFVVAA LLVEGSDLVV ENVGLNPTRA ALFDVLRLMG GSIEELNRRE VGGEPVADLR
VRHSLLTGID VDPAVVPSMV DEFPVLFVAA ALAKGRTVTT GLEELRVKES DRISAMRAAL
ELAGATVTET EDGLIIDGTG GDPLPGTAEG ASVVTHLDHR IAMSMAIAGI ASRNGVEVDD
TRPIATSFPV FESLLESATR P
|
|---|
| |