| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1278 |
|---|
| Symbol | |
|---|
| ID | 3917909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1318409 |
|---|
| End bp | 1319236 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640444014 |
|---|
| Product | putative methyltransferase |
|---|
| Protein accession | YP_496556 |
|---|
| Protein GI | 87199299 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.337373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA TCGCGGATTG GGAGGGCGGC GTTGGCCGCA ACTGGGCGGC ACAGTGGAGG
CGGACCGACG CGACCTTCGC GCAGCTGACG CCGCGCCTGC TCAATGCCAT TGCGGCAGAG
CCGGGCCGCC GCGTGGTCGA CATAGGCTGC GGCGCCGGCG AAGTTTCGCT GGCGGTCGCG
CGCGCCCGGC CGCAGGCGCA GGTCATCGGC GTCGACGTTT CACCAGACCT GGTGGATGCG
GCGCGCGGAC GGGCCGGCGC CTTGCCCAAT CTCTCGTTCG AACTGGCCGA TGCCTCGTCT
TGGACTTCGC CGCAGGGCGC GCCCGATCTT TACGTATCGC GCCACGGCGT GATGTTCTTC
CCCGATCCTC CGGCGGCCTT CGCGCATCTT GCGTCCGTCG CCGCACCGGA CGCACGCTTG
GTCTTCACCT GTTTTCGCGC GGCGAAGGAA AATGCCTGGG CCACCGGGAT CGCCAATCTG
CTGCCGCCTG CCGAGGTGCC GTCGCTACCC TTTCCTCCCG GACCATTCGC GTTTGCCGAT
CCGGAGCACG TCCGCCGCTG CCTCAAGGGC TGGCGCGACC TGGCCTTCAC CCCGGTCGAT
TTCGCTTATG TCGCGGGCGA GGGAGAGCAT GCCGTGGCCG AAGCCATGGC GCTGTTCCAG
CGAATCGGAC CCTCCGCATT CGCCTTGCGG ACCCTGCCCG AAGCGGAGCG CGCGACCTTC
GAAAAGCGCC TGCTCGAATT CGTAGAGGCG CACCATCAAG GCGGGCAGGT GACATTCCCT
GCCGCAGCAT GGCTAATTAC CGCCACGTCC GATCACGATG ATGGATGA
|
|---|
| Protein sequence | MTNIADWEGG VGRNWAAQWR RTDATFAQLT PRLLNAIAAE PGRRVVDIGC GAGEVSLAVA
RARPQAQVIG VDVSPDLVDA ARGRAGALPN LSFELADASS WTSPQGAPDL YVSRHGVMFF
PDPPAAFAHL ASVAAPDARL VFTCFRAAKE NAWATGIANL LPPAEVPSLP FPPGPFAFAD
PEHVRRCLKG WRDLAFTPVD FAYVAGEGEH AVAEAMALFQ RIGPSAFALR TLPEAERATF
EKRLLEFVEA HHQGGQVTFP AAAWLITATS DHDDG
|
|---|
| |