Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1250 |
Symbol | rplD |
ID | 3917881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1299478 |
End bp | 1300101 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640443986 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_496528 |
Protein GI | 87199271 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.919527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGTTC AGGTCCTCAA TCTCGACGGC ACCGCCGGCA AGGGCGAAGT GGAACTGTCG GACGACGTGT TCGGTCTCGA ACCGCGCGCC GACATCCTGC ACCGCGTTGT CACCTGGCAG CTCGAAAACC GTCGCGGCAT CGCCCGCAAG GCGCGTGAGC GTTCGGACGT TGCCCGCACC GGCAAGAAGT TCGGTCGCCA GAAGGGCGGC GGTACGGCTC GTCACGGTGA CCGCAAGGCG CCGATCTTCA TCGGCGGTGG CAAGGCCCAC GGTCCGCGCG TTCGCGAGTT CAACATCTCG CTGAACAAGA AGGTTCGCGC GCTCGGCCTC AAGATGGCGC TTTCGAGCAA GGCCAAGGCC GGTCTGGTCG TCGTCGACAA CCTCGACGTC GATGCCAAGA CCAAGGCTCT GGTCGGTCAG CTCGCCAAGG CGAACTGGGG CAAGAAGGTG CTCGTGATCG ACGGTGAAGG CGTCAACGAC AACTTCGCCA AGGCCGCCCG CAACATCGTC GGCGTGAACG TCCTCCCTGC GATCGGCGCG AATGTCTACG ACATCCTGAA GCATGACACG CTGGTGCTGA CGCGCGCTGC TGTCGAAAAG CTGGAGGCGC GTTTCAATGG CTAA
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Protein sequence | MKVQVLNLDG TAGKGEVELS DDVFGLEPRA DILHRVVTWQ LENRRGIARK ARERSDVART GKKFGRQKGG GTARHGDRKA PIFIGGGKAH GPRVREFNIS LNKKVRALGL KMALSSKAKA GLVVVDNLDV DAKTKALVGQ LAKANWGKKV LVIDGEGVND NFAKAARNIV GVNVLPAIGA NVYDILKHDT LVLTRAAVEK LEARFNG
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