Gene Saro_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1248 
SymbolrpsJ 
ID3917879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1298066 
End bp1298377 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID640443984 
Product30S ribosomal protein S10 
Protein accessionYP_496526 
Protein GI87199269 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCC AGAATATCCG CATTCGCCTC AAGGCCTTCG ATCATCGCGT TCTTGACCAG 
GCCACTGGAG AAATCGCGGA CACCGCACGC CGCACCGGCG CTCTCATCCG GGGTCCCATT
CCGCTCCCGA CGCGCATCGA AAAGTTCTGC GTCAACCGCG GTCCGCACAT CGACAAGAAG
TCGCGTGAGC AGTTCGAGGT CCGTACCTAC AAGCGCCTGC TCGACATCGT GCAGCCCAAT
GCGGCCACTG TCGACGCGCT GATGAAGCTG GACCTTGCTG CCGGCGTCAA CGTCGAGATC
AAGCTGGCCT GA
 
Protein sequence
MEAQNIRIRL KAFDHRVLDQ ATGEIADTAR RTGALIRGPI PLPTRIEKFC VNRGPHIDKK 
SREQFEVRTY KRLLDIVQPN AATVDALMKL DLAAGVNVEI KLA