Gene Saro_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1247 
Symbol 
ID3917878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1296706 
End bp1297896 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content63% 
IMG OID640443983 
Productelongation factor Tu 
Protein accessionYP_496525 
Protein GI87199268 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.727206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGG CTAAGTTTGA GCGGAACAAG CCGCACTGCA ACATCGGCAC CATCGGTCAC 
GTCGACCACG GCAAGACCAC GCTGACCGCC GCGATCACCA AGGTGCTCGC CGAGCAGGGT
GGCGCTGAAT TCACCGACTA CGCGAACATC GACAAGGCTC CGGAAGAGCG CGAGCGCGGC
ATCACCATCT CGACCGCACA CGTCGAGTAC GAGACCGCCA ACCGCCACTA CGCGCACGTC
GACTGCCCGG GTCACGCCGA CTACGTGAAG AACATGATCA CCGGTGCCGC CCAGATGGAC
GGCGCGATCC TGGTCGTGAA CGCTGCTGAC GGCCCGATGC CGCAGACCCG CGAGCACATC
CTGCTTGCCC GCCAGGTCGG CGTGCCCGCG CTCGTCGTGT ACATGAACAA GGTCGACCAG
GTCGACGACG AGGAAATCCT CGAGCTCGTC GAACTCGAAG TTCGCGAACT GCTGTCGTCG
TACGACTTCC CGGGCGACGA TATTCCGATC GTCAAGGGTT CGGCTCTGGC CGCTCTCGAA
GGCCGCGACG ACAACATCGG CAAGGACTCG ATCAACGCGC TCATGGCTGC CGTTGACGCG
TACATCCCGC AGCCGCCGCG TCCGACCGAC AAGCCCTTCC TGATGCCCGT CGAAGACGTG
TTCTCGATCT CGGGTCGCGG CACCGTGGTG ACCGGCCGTA TCGAAACCGG CATCATCAAG
GTCGGCGAAG AAGTCGAGAT CATCGGTCTG AAGGACACCC AGAAGACCAC CGTGACCGGC
GTCGAAATGT TCCGCAAGCT GCTCGACCAG GGCGAAGCCG GCGACAACAT CGGTGCGCTG
ATCCGCGGCA TCAAGCGTGA AGAAGTCGAG CGTGGGCAGG TTCTCGCCAA GCCCGGTTCG
GTGACCCCGC ACACCGAATT CTCGGCCGAG GTCTACGTGC TGTCGAAGGA CGAAGGTGGC
CGTCACACGC CGTTCTTCGC CAACTACCGC CCGCAGTTCT ACTTCCGCAC CACCGACGTC
ACCGGTGAGG TCGTCCTCCC CGAGGGCACC GAGATGGTGA TGCCGGGCGA CAACGTCACC
CTGGCTGTCA AGCTGATCGC TCCGATCGCG ATGGACGAAG GTCTGCGCTT CGCAATTCGC
GAAGGCGGCC GCACCGTCGG TTCGGGGGTT GTCAGCAAGA TCACGAAGTA A
 
Protein sequence
MAKAKFERNK PHCNIGTIGH VDHGKTTLTA AITKVLAEQG GAEFTDYANI DKAPEERERG 
ITISTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVNAAD GPMPQTREHI
LLARQVGVPA LVVYMNKVDQ VDDEEILELV ELEVRELLSS YDFPGDDIPI VKGSALAALE
GRDDNIGKDS INALMAAVDA YIPQPPRPTD KPFLMPVEDV FSISGRGTVV TGRIETGIIK
VGEEVEIIGL KDTQKTTVTG VEMFRKLLDQ GEAGDNIGAL IRGIKREEVE RGQVLAKPGS
VTPHTEFSAE VYVLSKDEGG RHTPFFANYR PQFYFRTTDV TGEVVLPEGT EMVMPGDNVT
LAVKLIAPIA MDEGLRFAIR EGGRTVGSGV VSKITK