Gene Saro_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1189 
Symbol 
ID3916486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1232357 
End bp1233088 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID640443925 
ProductABC transporter related 
Protein accessionYP_496468 
Protein GI87199211 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.377059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGAAG TTGCAGGCCT GACCGTTCCC CATCGCCTTC GCGATGTCAG CGCACGGTTC 
CCGTCCGGGC GCGTTACCGC GATCTGCGGG CCGAATGGCG CGGGCAAGTC GACGCTCCTC
GCCGCGCTTG CCGGTCTCGT GCCCGGCCTG TCCGGCACGA TCACGCTGGC AGGGGCGCCG
GTCGGCGGAA TGCTCCCCGA CGAGCGGGCT CGCCGCATCG GCTACCTCCC GCAATCGGGG
GAGGTCGCAT GGAACCTTTC CGTCCGCACG CTCGTCGGCC TCGGCCGTCT GCCGCACCGT
GCCTCGCGCG CCGAAGATGC CGAAGCGGTC GAGGAAGCCC TCGCGGCCCT TGGTCTCGGG
CCGCTGGCGG AGCGGGCGCT GTCCACGCTC TCGGGCGGAG AGCGCGCCCG CGCCCTGCTT
GCCCGGGTCC TCGCCACCCG CCCGCACTGG ATACTTGCCG ACGAACCGCT CGCCGCCCTC
GATCTGGCGC ACCAGCAGGC ACTGGCCCGG CAATTGCGCG CGCTCGCGTC AGAGGGGCGC
GGCGTCGTTC TCGTCGTCCA TGATCTCGCG TTGGCGATGA ACCATGCCGA TCACGTGGTC
GTCCTTCACG AAGGTCGCGT TGCGGCACAG GGCAGGCCGG AAACCGCGCT GTCGCAGCAG
GTCATCGAAG ATGTCTGGGG CATGTCGGCC CGCTGGCTGG GCGAGCCGGG CCACCGCGCG
CTCGCGCTCT GA
 
Protein sequence
MLEVAGLTVP HRLRDVSARF PSGRVTAICG PNGAGKSTLL AALAGLVPGL SGTITLAGAP 
VGGMLPDERA RRIGYLPQSG EVAWNLSVRT LVGLGRLPHR ASRAEDAEAV EEALAALGLG
PLAERALSTL SGGERARALL ARVLATRPHW ILADEPLAAL DLAHQQALAR QLRALASEGR
GVVLVVHDLA LAMNHADHVV VLHEGRVAAQ GRPETALSQQ VIEDVWGMSA RWLGEPGHRA
LAL