Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1153 |
Symbol | recF |
ID | 3916450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1201482 |
End bp | 1202555 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640443889 |
Product | recombination protein F |
Protein accession | YP_496432 |
Protein GI | 87199175 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.409843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTCA CCCGCCTGAC CTTGCGCGAC TTTCGCAACC ATGCCGCGAC GCGGCTGGAG GGCATGCGCG CGTTCAACGT GCTGGTGGGC GAGAACGGCG CGGGCAAGAC CAATGTGCTG GAGGCGATCA GCCTGCTGGC GCCGGGGCGC GGGCTACGGC GCGCGCAGCC AGCAGAGATG GCCGGGCGCG AGGGGCCAGG CGGTTTTGCC ATAGCAGCCG AAATGGAAGA TGGGGCGGTG CAGATCGGCA CGGCGACATC TCCCGACGCG CCGGGCCGGC GGTCGGTGCG GATCAATGGC GTCGAAGGGC CCGCGGCACG GCTGGCCGAA TGGCTTTCGA TAACCTGGCT GACCCCGGCG ATGGACCGGA TTTTCGCGGA GAGCGCGGGT TCGCGGCGGC GCTTCCTTGA CCGGCTGGTG CTGGCTCGCG ACCCCGGACA TGCGCGCAAC GCGACCCGCT ATGAAACGGC ACTGCGCGAG CGGAACCGCC TGCTGGGCGA GGTTGCCGAG CCTGACCCGC TATGGCTGGA CGGGATAGAG GCGCAGATGG CCGAAACCGG CGCAGCCATG GCGGCGGCGC GCACGGAACT GGTGGCGGAC TTGTCGCGCG TGCTGGAAAC CGTCCCCGAT CAACCCTTTG CCCGACCATC GCTGCGCTAT GCCAGCGAAG TACCGCCGGA CGCCGACGGC TTGCGGGCCA TGCTGCGCGA AGGGCGCCGG CGGGACCGGG CGGCAGGGCG TTCGCTGATC GGACCACATC GCGACGACCT GGCCGTCCTG CTCGCAGCGA AGAACGCCCC CGCCGCAGAC TGTTCGACGG GGGAGCAGAA GGCGATGCTG ATCGCCATCG TGCTGGCCCA CGCCGGACTG ACGGCCGGGG AGCGCCCGCG GCTGCTGCTG CTCGACGAGA TTGCGGCGCA CCTTGACCCG GTGCGGCGCG GCGCGCTGTT CGAACGGCTG GCGACGAGCG GCGCGCAAGT GTGGATGACC GGGACCGAGA TGGCGCCTTT CGCGCAGATC GCGGGGGAAA GCGCGATCTG GTCTGTGCGC GACGGGGCCG TTTTCGCGCA GTAA
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Protein sequence | MSLTRLTLRD FRNHAATRLE GMRAFNVLVG ENGAGKTNVL EAISLLAPGR GLRRAQPAEM AGREGPGGFA IAAEMEDGAV QIGTATSPDA PGRRSVRING VEGPAARLAE WLSITWLTPA MDRIFAESAG SRRRFLDRLV LARDPGHARN ATRYETALRE RNRLLGEVAE PDPLWLDGIE AQMAETGAAM AAARTELVAD LSRVLETVPD QPFARPSLRY ASEVPPDADG LRAMLREGRR RDRAAGRSLI GPHRDDLAVL LAAKNAPAAD CSTGEQKAML IAIVLAHAGL TAGERPRLLL LDEIAAHLDP VRRGALFERL ATSGAQVWMT GTEMAPFAQI AGESAIWSVR DGAVFAQ
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