Gene Saro_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1153 
SymbolrecF 
ID3916450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1201482 
End bp1202555 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content70% 
IMG OID640443889 
Productrecombination protein F 
Protein accessionYP_496432 
Protein GI87199175 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.409843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTCA CCCGCCTGAC CTTGCGCGAC TTTCGCAACC ATGCCGCGAC GCGGCTGGAG 
GGCATGCGCG CGTTCAACGT GCTGGTGGGC GAGAACGGCG CGGGCAAGAC CAATGTGCTG
GAGGCGATCA GCCTGCTGGC GCCGGGGCGC GGGCTACGGC GCGCGCAGCC AGCAGAGATG
GCCGGGCGCG AGGGGCCAGG CGGTTTTGCC ATAGCAGCCG AAATGGAAGA TGGGGCGGTG
CAGATCGGCA CGGCGACATC TCCCGACGCG CCGGGCCGGC GGTCGGTGCG GATCAATGGC
GTCGAAGGGC CCGCGGCACG GCTGGCCGAA TGGCTTTCGA TAACCTGGCT GACCCCGGCG
ATGGACCGGA TTTTCGCGGA GAGCGCGGGT TCGCGGCGGC GCTTCCTTGA CCGGCTGGTG
CTGGCTCGCG ACCCCGGACA TGCGCGCAAC GCGACCCGCT ATGAAACGGC ACTGCGCGAG
CGGAACCGCC TGCTGGGCGA GGTTGCCGAG CCTGACCCGC TATGGCTGGA CGGGATAGAG
GCGCAGATGG CCGAAACCGG CGCAGCCATG GCGGCGGCGC GCACGGAACT GGTGGCGGAC
TTGTCGCGCG TGCTGGAAAC CGTCCCCGAT CAACCCTTTG CCCGACCATC GCTGCGCTAT
GCCAGCGAAG TACCGCCGGA CGCCGACGGC TTGCGGGCCA TGCTGCGCGA AGGGCGCCGG
CGGGACCGGG CGGCAGGGCG TTCGCTGATC GGACCACATC GCGACGACCT GGCCGTCCTG
CTCGCAGCGA AGAACGCCCC CGCCGCAGAC TGTTCGACGG GGGAGCAGAA GGCGATGCTG
ATCGCCATCG TGCTGGCCCA CGCCGGACTG ACGGCCGGGG AGCGCCCGCG GCTGCTGCTG
CTCGACGAGA TTGCGGCGCA CCTTGACCCG GTGCGGCGCG GCGCGCTGTT CGAACGGCTG
GCGACGAGCG GCGCGCAAGT GTGGATGACC GGGACCGAGA TGGCGCCTTT CGCGCAGATC
GCGGGGGAAA GCGCGATCTG GTCTGTGCGC GACGGGGCCG TTTTCGCGCA GTAA
 
Protein sequence
MSLTRLTLRD FRNHAATRLE GMRAFNVLVG ENGAGKTNVL EAISLLAPGR GLRRAQPAEM 
AGREGPGGFA IAAEMEDGAV QIGTATSPDA PGRRSVRING VEGPAARLAE WLSITWLTPA
MDRIFAESAG SRRRFLDRLV LARDPGHARN ATRYETALRE RNRLLGEVAE PDPLWLDGIE
AQMAETGAAM AAARTELVAD LSRVLETVPD QPFARPSLRY ASEVPPDADG LRAMLREGRR
RDRAAGRSLI GPHRDDLAVL LAAKNAPAAD CSTGEQKAML IAIVLAHAGL TAGERPRLLL
LDEIAAHLDP VRRGALFERL ATSGAQVWMT GTEMAPFAQI AGESAIWSVR DGAVFAQ