Gene Saro_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1143 
Symbol 
ID3916439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1191311 
End bp1192054 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID640443878 
Producthypothetical protein 
Protein accessionYP_496422 
Protein GI87199165 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACT GGAACGACCC TCGGCCCACC GGAACGGGCT TCGGCGCGTC TCCGAGCCTT 
TCCGGCGTCC AAGGCCGCAG CGAAGTGTTC GATGCAGGCC TGCGCCGTCA CATGCTGTCG
ATCTACAACT ACATGGCCTC GGGCGTCCTG CTTTCGGGCA TCGTCGCGCT GCTGTTCGCC
ACTTCGGGCG CCGCGCTCGC CGTGTTCGGC ACGCCGCTCC GCTGGGTCGT GGCGCTCGCC
CCGCTGGCCT TCGTGATGAT CATGAGCTTT GGCGTGAACC GCCTCTCGAC CTTCGCAATG
CAGGCGATGT TCTGGGGCTT CAGCGTCGCG ATGGGTCTGT CGCTTTCGGC GATCTTCTTC
ATCTACACCG GCCCCTCGAT CGCGGTGACG TTCTTCGCAA CGGCGGGCGC CTTCGCCGGC
CTCAGCCTGT TCGGCTACAC CACCAAGAAG GACCTGTCGG GCTTCGGCAG CTTCCTCATC
ATGGGCGTGT TCGGCCTGCT GATTGCTTCG CTGATCAACA TGTTCCTGCA GTCGCCGGGT
CTCGCCTGGG CGGTCAGCTT CCTTGGCGTG CTGATCTTCG CGGGTCTTAC CGCCTATGAT
ACGCAGAAGC TCAAGGAGCA GTATGCCTAT GTCGCGGGAA CCGATTTCGC GGGCAAGGCC
GTGGTCCTCG GCGCGCTGAA CCTCTACCTC GACTTCATCA ACATGTTCCA GTTCCTGCTG
CAGTTCATGG GCGACCGCCG CTGA
 
Protein sequence
MANWNDPRPT GTGFGASPSL SGVQGRSEVF DAGLRRHMLS IYNYMASGVL LSGIVALLFA 
TSGAALAVFG TPLRWVVALA PLAFVMIMSF GVNRLSTFAM QAMFWGFSVA MGLSLSAIFF
IYTGPSIAVT FFATAGAFAG LSLFGYTTKK DLSGFGSFLI MGVFGLLIAS LINMFLQSPG
LAWAVSFLGV LIFAGLTAYD TQKLKEQYAY VAGTDFAGKA VVLGALNLYL DFINMFQFLL
QFMGDRR