| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1047 |
|---|
| Symbol | |
|---|
| ID | 3915829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1086525 |
|---|
| End bp | 1086989 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640443781 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_496326 |
|---|
| Protein GI | 87199069 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAGC CTTCAGTACT GTTCGTGTGT CTTGGCAATA TCTGCCGCTC CCCGCTGGCC
GAGGCGGCCC TGCGCGCGCG CGCCTGGGAG GCGGGGGTTG CCGTGACGGT GGATTCCGCA
GGCACCGGAG ACTGGCACGT CGGTCGCCCG CCCGATCCGC GCGCGCAGGC GGTGGCCCTG
GCGAACGGCC TCGACATTTC GGGGTACCGC GCGCGGCAGG TGGCGGCGGA GGACTTCGCC
CGCTTCGGGC ACATCTTCGC GCTCGATCCG CAGAACCTCA AGGATCTGCG CCGCATCCAG
CCGGCGCGCG CCGTTGCCGA GGTGGGCTTG CTCATGGACA TCGTCCCGGG GCGCAAGGGT
ACGGCGGTGA TCGACCCCTA CTACGGCGAC GAGCAGGATT TCGAGCAGGC ATGGGCCGAC
GTGAGCAGCG CGGCCGAGCA GATCGTCCGG CGGTTCCTGC GCTAA
|
|---|
| Protein sequence | MSQPSVLFVC LGNICRSPLA EAALRARAWE AGVAVTVDSA GTGDWHVGRP PDPRAQAVAL
ANGLDISGYR ARQVAAEDFA RFGHIFALDP QNLKDLRRIQ PARAVAEVGL LMDIVPGRKG
TAVIDPYYGD EQDFEQAWAD VSSAAEQIVR RFLR
|
|---|
| |