| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1028 |
|---|
| Symbol | |
|---|
| ID | 3915810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 1065625 |
|---|
| End bp | 1067019 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640443762 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_496307 |
|---|
| Protein GI | 87199050 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3800] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCC GACCGCTCTA TCTCGGCCCC CGGCTGAAGC GCATCCGGCG CGAACTGGGA
CTTACCCAGC AGGCCATGGC GGAGGAGCTG GGGATTTCGC CCAGTTACAT CGCGCTGATC
GAACGAAACC AGCGACCGCT GACCGCCGAC CTTCTGCTGC GCCTGGCGCG GGCCTACAAA
CTGGACATGG CAGACCTCGC CGCGGACGAA CGCGACGACT ATGCGCGGCG TCTTTCCGAT
GCACTGCGCG ATCCGATCTT CTCGGACATC GACCTGCCGG CGCTGGAAGT GGCCGACGTC
GCCGCGAGCT TTCCCGGCGT GACCGAGGCA ATGTTGCGGC TTTACGGTGC ATGGCAGCGC
GAACAGCAGG CGTTGGCCGA ACAGCGCAAC GCCGGGCCGG GCACGAGCGC AAGCGACCCG
ATCGGCGAAG CGCGGCGGTT CGTGGCCGCG CGGCGCAACT ACTTCCCGAC CATAGATTCG
CGGGCAGAGG AACTGGCGTC GGAAATCGAC AAAGCGGGCG GGCCGCAGGA ATGGCTCCGC
AAGCAGGGCG TGCGCGTGCG CTTCCTGCCG CCCGACGTGA TGATGGACGC GGTGCGGCGC
TATGACCGGC ACAACGAGCA ACTGCTGATC GACGACACGC TGCCACTGTC CAGCCGCGTC
TGGCAGTTGC TGCAACACAT CGCCTACACC GCGATACGCT CAGAGATCGC GGCGGTGATC
CGGGGGGAAA GCTTTGCCAG CCAGACCGCT GCGAACCTCG TGCGCAGGGC GCTGGCGAGC
TATGCCGCAG CGGCCATCGC CATGCCTTAT GACCGGTTTG CGCGAGCCGT GGATGCGAGG
CGGTACGACA TCGAGGCGCT GTCCGGCCAG TTCGGCACCA GTTTCGAGCA GGTGGCGCAC
CGGCTGACGA CGCTCAACCG CCCGGGGCAG GAGCGAGTGC CGTTCTTCTT CATACGGGTC
GATTCGGCGG GCAACGTGTC CAAGCGGCTC GACGGTGCCG GCTTCCCGTT CGCGGCGCAT
GGCGGCGGTT GCCCGCTGTG GAGCGTGCAC GACACCTTCC GCACGCCGGG GCAGATCGTC
ACGCAATGGC TTGAACTGCC CGACGGACAG CGCTTCTTCT CGCTTGCGCG CACGGTGACG
TCTGGCGGCG GCGGTTTCGA CCGTCCGAGG ATGACGAGGG CCATCGCGCT GGCCTGTGCA
GCCGAACACG CCCCGAGGCT GGTCTATGCG GCGGGGGGCG ATCCAAGGGC GGTTGCGGCA
ACGCCGATCG GAGTGACCTG CCGCCTATGC CACCGCGCCC AGTGCACTGC ACGCGCCGAA
CCTCCCATCG GACGCGAGAT CCTACCCGAC GACTATCGGC GTGGGGCCGA GCCGTTCAGC
TTTGCGGAGA GCTGA
|
|---|
| Protein sequence | MASRPLYLGP RLKRIRRELG LTQQAMAEEL GISPSYIALI ERNQRPLTAD LLLRLARAYK
LDMADLAADE RDDYARRLSD ALRDPIFSDI DLPALEVADV AASFPGVTEA MLRLYGAWQR
EQQALAEQRN AGPGTSASDP IGEARRFVAA RRNYFPTIDS RAEELASEID KAGGPQEWLR
KQGVRVRFLP PDVMMDAVRR YDRHNEQLLI DDTLPLSSRV WQLLQHIAYT AIRSEIAAVI
RGESFASQTA ANLVRRALAS YAAAAIAMPY DRFARAVDAR RYDIEALSGQ FGTSFEQVAH
RLTTLNRPGQ ERVPFFFIRV DSAGNVSKRL DGAGFPFAAH GGGCPLWSVH DTFRTPGQIV
TQWLELPDGQ RFFSLARTVT SGGGGFDRPR MTRAIALACA AEHAPRLVYA AGGDPRAVAA
TPIGVTCRLC HRAQCTARAE PPIGREILPD DYRRGAEPFS FAES
|
|---|
| |