| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1017 |
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| Symbol | tolB |
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| ID | 3915799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1056470 |
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| End bp | 1057855 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640443751 |
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| Product | translocation protein TolB |
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| Protein accession | YP_496296 |
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| Protein GI | 87199039 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.609487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCC GTCACCTTCT CCTGCTAGCG GGGCTGGTCT CCGCGCCAGC CATCGTCGCG
GCCCAGCAGA CCGCATTGCC GTCGTCTAGC GCGGCGCAGG CATCGGGCGA CGACGACGGT
GGCCTGACCG GCTCTGTTTC CGACGAAAGC GAGTGGCAGG ACCTCGGCAT CGCCATTCCC
TCGTTCCCGA CCAACGCTTC GGTCCCGACC GCGGCCGAAG GCGGGACCAC CGAGGCGTTG
GGGCGGAACG TCGCGCGCGT GGTATTCAAC GATCTCAAGA ACAACGGCCT GTTCAAGCCG
GTCGGCCCGG ATGCGCTTCC CGCCATCGCC TTTCCGCAGG TGGCCGCGCC CGCGTTCGAC
GCCTGGCGCG GCCGTTCGGC CGAAATGCTG GTGCAGGGCT TCGTCAAGGC GAACGAGGAC
GGCCGCCTGA CGGTCGGCTG CTATCTCTAC GACGTCGCGC TCGGCAGTGA ACTGGCGCGG
CAGGGCTATG TCGTGAAGCC GGAGGAATGG CGCCGCGCCG CGCACAAGTG CGCTGACATG
GTCTATTCGC GCCTGTCCGG CGAAAGCCCG TTCTTCGACA GCAAGATCGC CTATATCGCC
GAGACCGGGC CCAAGGACCG CCGCCGCAAG CAACTGGCGA TCATGGATTC CGATGGCGCC
AACCATCGCT TCATCACCAA TGGCCAGGCG ACCGCGCTGA CGCCGCGCTA TTCGCCGGAC
TACAGCCAGA TTGTCTACCT CAGCTATCTG AACGGCGCGC CGCGCATCTA CATCTACAAC
ATCGGCACCG GCCAGCAGAA GCTCGTCACG TCGAGCACCA ACCCAACCTT CGCCCCACGC
TGGTCGCCCG ACGGCAAGTG GATTCTCTAT TCGATGTCTG TCGCGGGCAA CACCGACATC
TATCGCGTCT CGGTCAACGG CGGCGCCTCG ACGCGTCTGA CCGACAGCCC GGGCATCGAC
GTCGGCGGGT CCTATTCGCC CGATGGCAGC AGGATCGTGT TCGAAAGCGA CCGTTCGGGC
AGCCAGCAAC TCTACGTGAT GAACGCGGAT GGATCGAACC AGAAGCGCAT CAGCTTCTTC
GGTGGCCGCG CCGCGACGCC CGAATGGTCC CCGCGCGGCG ACCAGATCGC CTTCACGCAT
CTCGGCGGCA ATTTCCGCAT CGCGGTGACC GATCCCTCGG GCGGCAACAT GCGCTTCCTC
ACCGATAGCT GGCAGGACGA GGCGCCCACC TGGTCGCCCA ACGGCCGCAT CGTCCAGTTC
TTCCGGACCG AGCGCGGCAG CGGCAAGACC GGCATCTGGC AGGTTGACCT CACCGGCCGG
AACGAGCGGA AACTGAACAC GCCCGTCGAT GGTTCCGACC CTGCATGGGG ACCCGTCCTG
CCCTGA
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| Protein sequence | MKIRHLLLLA GLVSAPAIVA AQQTALPSSS AAQASGDDDG GLTGSVSDES EWQDLGIAIP
SFPTNASVPT AAEGGTTEAL GRNVARVVFN DLKNNGLFKP VGPDALPAIA FPQVAAPAFD
AWRGRSAEML VQGFVKANED GRLTVGCYLY DVALGSELAR QGYVVKPEEW RRAAHKCADM
VYSRLSGESP FFDSKIAYIA ETGPKDRRRK QLAIMDSDGA NHRFITNGQA TALTPRYSPD
YSQIVYLSYL NGAPRIYIYN IGTGQQKLVT SSTNPTFAPR WSPDGKWILY SMSVAGNTDI
YRVSVNGGAS TRLTDSPGID VGGSYSPDGS RIVFESDRSG SQQLYVMNAD GSNQKRISFF
GGRAATPEWS PRGDQIAFTH LGGNFRIAVT DPSGGNMRFL TDSWQDEAPT WSPNGRIVQF
FRTERGSGKT GIWQVDLTGR NERKLNTPVD GSDPAWGPVL P
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