Gene Saro_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1014 
Symbol 
ID3915796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1054424 
End bp1055125 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content66% 
IMG OID640443748 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_496293 
Protein GI87199036 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein
[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.362797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTCC AGATGCTTGC CAACGGCGTT TCCTTCGCGC CGACCTCGCT CAATCCGGTG 
CAACTGTTCC TCGATGCCGA CTATGTCGTG CAGGCGGTCA TGGCGGGCCT CGTGCTCGCG
AGCATCTGGA CGTGGACGAT CATCATCGGC TTCTCGCTTA AGATGGGCAG CGTCCAGCGC
GGCTGCGACG CGTATGAGCG CGAATTCTGG GAAGCGCGCG ACATCGACCA GTTCCACAAG
GACAACAAGG GCAAGGACCT GCCATCGGTG CGCGTGGTCG CGGCCGCGCT GACCGAATGG
CGCCGGTCCA CCTCGGGCAG CGCTATCGAT CGCGATGGCA CCCGGCAGCG GCTGACGACC
GCGCTCGATG GGGCGGTGGT GGCCGAGACC GATGCACTCG CCAGCCGCCT GAACTTCCTC
GCCACGGTCG GGTCGGTGGC GCCCTTCGTC GGGCTGTTCG GCACGGTCTG GGGCATCATG
GACAGCTTTT TCAACATCGG CGCGCAGCAG AACTCCTCGC TCGCCGTCGT CGCTCCCGGC
ATTTCCGAGG CGCTGTTCGC CACGGCCATC GGCCTTTTCG CGGCGATCCC GGCGGTCATC
GCGTACAATC GCTTCTCGCA CCGCGTGAAC CGCTTCGAGA CGCGCCTCTA CCGCTTCGCC
GACCGGTTCC ACGCCTCGCT CAGCCGCGAA CTGGAGGTCT GA
 
Protein sequence
MTLQMLANGV SFAPTSLNPV QLFLDADYVV QAVMAGLVLA SIWTWTIIIG FSLKMGSVQR 
GCDAYEREFW EARDIDQFHK DNKGKDLPSV RVVAAALTEW RRSTSGSAID RDGTRQRLTT
ALDGAVVAET DALASRLNFL ATVGSVAPFV GLFGTVWGIM DSFFNIGAQQ NSSLAVVAPG
ISEALFATAI GLFAAIPAVI AYNRFSHRVN RFETRLYRFA DRFHASLSRE LEV