Gene Saro_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0935 
Symbol 
ID3918021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp982797 
End bp983837 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID640443669 
Productdihydroorotase 
Protein accessionYP_496214 
Protein GI87198957 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGA CGCTGACGAT CCGCCGCCCC GACGACTGGC ATGTCCACCT GCGCGACCGC 
GACGTACTGC GGGGCGTCGT TCCCTATACC GCCCGGCAGT TTGCCCGCGC CATCGTCATG
CCCAACCTTT CGCCGCCGAT GACCGACGTT GCGGGCGTTG CCGCCTATCG CGATCGCATC
CTTGCCGCCC TGCCGCAGGG TAGCGCCTTC ACGCCGCTGA TGACGCTGTA CCTTACCGAT
TCGACCGACA TCGAAGAGGT TGCGCGCGGC TTTGCCGAAG GCGTGTTCGT CGCCGCCAAG
CTCTATCCAG CCCATGCGAC GACCGGTTCC GCGCACGGCG TCACCGACAT CCGCAACATC
TATCCGGTGC TGGAGAAGAT GCAGGAGATC GGGATGCCAC TGCTGATCCA CGGCGAGGTG
ACCGATTCCC ATGTCGACAT CTTCGACCGC GAAGCCGTGT TCATCGAGCG GACGCTGACC
CGCCTCGTGG CCGACATGCC GGCCCTTCGC ATCGTCTTCG AGCATATCAC GACCGAGGAG
GCGGCCCAGT TCGTGGAAGG CGCGGGCGAC AGCATCGCCG CGACGATCAC GCCGCAGCAT
CTCCACATCA ACCGCAACGC CATGCTCGTC GGCGGCATCC GTCCGCACGC CTTCTGCCTG
CCGGTCGCCA AGCGCGAGAA GCACCGGCTT GCCCTGCGCA AGCTTGCCAC CTCGGGCTTT
TCGCGGGTGT TCCTGGGAAC CGATACCGCG CCTCATGCCA AGCACCTGAA GGAAGCGGCA
TGCGGCTGTG CGGGGATATT CAACGCGCCC TTCGCGCTCG AAAGCTATGT CACGGTCTTC
GACGAGGAAG GCGCGCTCGA CCGGTTCGAG GCCTTTGCCT CGCTCAACGG GCCCGCGTTC
TACCGGATGC CGGTGAACGA GGACCGCATC GTGCTGGAAA GGGCGCCCAT CGAGGTGCCT
GAGGTGATCG ACTGCAACGG CACCGCAATC GTGCCCTTCC ACGCCGGTGA GACGCTCGGC
TGGCGAATCG CCGCGGCCTG A
 
Protein sequence
MTETLTIRRP DDWHVHLRDR DVLRGVVPYT ARQFARAIVM PNLSPPMTDV AGVAAYRDRI 
LAALPQGSAF TPLMTLYLTD STDIEEVARG FAEGVFVAAK LYPAHATTGS AHGVTDIRNI
YPVLEKMQEI GMPLLIHGEV TDSHVDIFDR EAVFIERTLT RLVADMPALR IVFEHITTEE
AAQFVEGAGD SIAATITPQH LHINRNAMLV GGIRPHAFCL PVAKREKHRL ALRKLATSGF
SRVFLGTDTA PHAKHLKEAA CGCAGIFNAP FALESYVTVF DEEGALDRFE AFASLNGPAF
YRMPVNEDRI VLERAPIEVP EVIDCNGTAI VPFHAGETLG WRIAAA