| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0895 |
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| Symbol | |
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| ID | 3917981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 951145 |
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| End bp | 953454 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640443629 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_496174 |
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| Protein GI | 87198917 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0618302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGATCA ACCGCGCATC GGCGCGCCTT TTGGCGCATG CCAGCCTCGT CGCCGCAACC
TTCGCCGTTG CCCAGCCAGC CCTTGCCCAG AGCGCCGACG TGCAGGCCGA CGCTTCGGCA
GAGGATGGCA ACGAGATCAT CGTGACCGCG CAGAAGCGCG CGCAGTCGCT TTCCGACGTT
TCGCTTTCGG TCGCCGCGGT CGGCACCGAA CAGCTTGCCG CCAACAACAC CGTCAACCTC
GAAGGCCTGC AGACGCTGGT GCCCTCGATC AGCTTCGGCA ACGACTTCAA CTTCGCCAAG
CTGTTCATCC GCGGCATCGG CCTGTCCAGC TCGCTGCCGG GCGTCGATCC GTCGGTCGCG
CTGCACGTCG ACGGCGTGGT CGTCAGCCTT GCCCAGGCGC AGCTCGGTTC GATGTTCGAC
CTCGAGCGCG TCGAAGTGCT GCGCGGGCCG CAGGGCACGC TTTACGGTCG CAACGCGACG
GGCGGCGCGG TCAACCTCAT CACCGCCAAG CCCACCGACA CGCTTGACGG TTATGTCCGC
CAGACCATCG GCGGCGACGC GCTGCTGATC CAGACCGACG CGGCCATCGG CGGCCCGATC
GCCGAGGGCG TGCGCGCCCG CCTTGCCGTG CAGCGCATCC ACCGCGACGG CTATGGCATC
AACGAATACA CCGGCAACGA GATCGACAAC GCCAACCAGT GGTCGGTGCG CGGCCACCTG
CAGTTCCTGC CCACCGACAA GCTCTCGATC CTGCTGACCG GCGAACTGCA CACCGAGGAC
GACCGCTCGC TGGCGGTGAA GTTCCGCGAG GTTTCCTTCC CCGGCACCAG CACGGCCAGC
CTGACCGCGC TCGGCCAGCG CACCAACGCC GACGGCTCGC AGGCCTCGTT CGCGAAGAAC
GTGCGCAACC TCAATACCAA CTTCGACCCG ATCAACGACC GCAAGCAGTA CGCCTTTACC
GGGATCGTCG ATTATGACGC GTCGGATGCC GTCTCGCTCA AGTCGCTGAC GACCTATCGC
AATTTCCGCG CGATCTTCTT CCATGACTTC GACATGTCGT CGTACCGTGG TTACCCGCTG
GCCGAGACCA CTTCGGTGCG CACCAGCGCG AACCACTGGC AGCCCGTGTT CCAGCACCAG
TTCAGCCAGG AACTCCAGGC CAATGTCGAG ACCGACAAGC TCCACGCCGT GGTCGCCGCG
TTCTATCTCA AGGAGAAGAT CCGCGTCGAG AACCACATCG GCTACGACGT TCTGACCAAC
ACCGATCCCT ATCGCGTGCA GTTCGACGGC AAGCTCGACG TCGAGACCTG GGCGGCTTTC
GCCAACGTCA CCTACGACCT GAGCGATCAG TTCTCGATCA AGCTGGGCGG CCGCTATTCG
TGGGAAAAGC GCCACATCAA CAACAACAGC GGCATAGGCA CCGCAGCAAC CGGCTTCGTG
CTCGATCCGC TGCAGTGGAA CACCTCGAAG ACCTGGACCG ACTTCTCGCC GTCCGCCGGT
TTCGAGTTCC GCCCGAACGA CGACGTGATG GCCTATTTCA ACTGGTCGCG CGGCTTCAAG
TCGGGCACCG CCGAGATCGG CTCGCGTCGT TCGGCAACCG CGACGACGCC CTTCGTGAAC
CCTGAAAAGG TCGAGGCCTT CGAAGGCGGC GTGAAGTACA GCGCGGGCTC GATGCAGGCC
AACCTGGCGG TGTTCTACCA CAAGCTGAAG AACGGCCAGT TCCAGCGCAC CTTCCCGATC
CCGAACCCGC CGTTCTTTGC CAGCGCGCTT GAAAACGCGG CGGAATCGCG CGCCTACGGT
GCGGAATTCG AACTGCGCTG GCGTCCGGTC CAGGGCCTCT CGCTCGATGC CTCGGCCGCC
TACCTCAATT CGAAGTTCAC CAAGTTCTTC TCGAAGAACC CGCTGAACGC GGCGCTCTTC
GGCCCCGGCG GCTCGTCGCT GCCCGACGAG GACCTGTCGG GCAACTACAC CCGCATGAGC
CCGAAGTGGA CGTTCAACTT CAACCCCACC TACCAGGTCC CGCTGAACAG CGGCGCCAGC
GTGACGCTGG GGGCGAACGT TTCCTACCGT TCCAAGCAGT ACCACACCGA GTTCAACGAC
GACCGCATGG CCGCCGACAG CTATGCGATG GTCGATGCCA ACGTGAAGTA CCGCCACTCG
GACGACCGCA CCTCGGTCAA CCTGTGGGTC CGCAACCTCA CCGACAAGCT GGTCTGGGCG
GGCAGCTATG CCGTGGCGAC CAGCCGCACC ATCGGCGGTA CGCTGATGCC GCCGCGCACT
TATGGCGTGA CGCTCGGCTA CGAATTCTGA
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| Protein sequence | MKINRASARL LAHASLVAAT FAVAQPALAQ SADVQADASA EDGNEIIVTA QKRAQSLSDV
SLSVAAVGTE QLAANNTVNL EGLQTLVPSI SFGNDFNFAK LFIRGIGLSS SLPGVDPSVA
LHVDGVVVSL AQAQLGSMFD LERVEVLRGP QGTLYGRNAT GGAVNLITAK PTDTLDGYVR
QTIGGDALLI QTDAAIGGPI AEGVRARLAV QRIHRDGYGI NEYTGNEIDN ANQWSVRGHL
QFLPTDKLSI LLTGELHTED DRSLAVKFRE VSFPGTSTAS LTALGQRTNA DGSQASFAKN
VRNLNTNFDP INDRKQYAFT GIVDYDASDA VSLKSLTTYR NFRAIFFHDF DMSSYRGYPL
AETTSVRTSA NHWQPVFQHQ FSQELQANVE TDKLHAVVAA FYLKEKIRVE NHIGYDVLTN
TDPYRVQFDG KLDVETWAAF ANVTYDLSDQ FSIKLGGRYS WEKRHINNNS GIGTAATGFV
LDPLQWNTSK TWTDFSPSAG FEFRPNDDVM AYFNWSRGFK SGTAEIGSRR SATATTPFVN
PEKVEAFEGG VKYSAGSMQA NLAVFYHKLK NGQFQRTFPI PNPPFFASAL ENAAESRAYG
AEFELRWRPV QGLSLDASAA YLNSKFTKFF SKNPLNAALF GPGGSSLPDE DLSGNYTRMS
PKWTFNFNPT YQVPLNSGAS VTLGANVSYR SKQYHTEFND DRMAADSYAM VDANVKYRHS
DDRTSVNLWV RNLTDKLVWA GSYAVATSRT IGGTLMPPRT YGVTLGYEF
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