Gene Saro_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0873 
Symbol 
ID3917958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp928492 
End bp929379 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID640443606 
ProductLysR family transcriptional regulator 
Protein accessionYP_496152 
Protein GI87198895 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.155303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATC GCTGGGACGG GATAGACGAG GTCGTGGCAG TGGCCGATAC CGGCACTTTC 
GTGGCCGGGG CCAAACGGCT CGGAACCTCC ACATCGCACG TCAGCCGGGC GGTCGCGCGG
CTCGAACAGA GCCTCGGCGC GCAGTTGTTC CACCGCACCA CCCGCGCCGT CAGCATGACC
GATACCGGGC GCATGCTGGT CGACCAGTTC CGCCGCCTGA TCGCAGAGCG CGACGAGGCC
ATCGCGATGC TCGATCTCCA GGGCGAGCCG CAGGGGCAGC TTCGCATCAC CTGCCCCACC
GCGCTGGGCG AGCGGTTCGT CGCGCCCATC GTGCGGGCCT ATGTGCAGGA ATATCCCAAG
CTCTCGGTCG ACCTCGACAT GTCGAACCGC GTGGTCGAAC TGGTCTCCGA AGGCTACGAC
CTTGCCATCC GCACCGGCAC CCTGCCCGAC AGCCGCCTGA TCCGCACGCA GATCGCGACG
CGCGGCATCG TCACCTGCGC CGCGCCTTCC TATCTGGAAG AGCGCGGGAC GCCGCAGACG
GTGGACGACC TGCTTGGCCA CGAGTGCATC CCCGCGACGT CCGACGTGTG GCGCTACCGC
GTGGACGGCG AGCAGCGGAC CATCCGGCCC CGGGGACGCT GGCGTTGCAG CAACGGCGCG
GCGGTGTTCG ACGCGGCGGT GGCCGGCATG GGCCTGTGCC AGCTGCCCGC CTTCTACGTG
AACAGGGCCA TCGCCGCCGG TCAGCTCGTC CCGGTGCTGG ACGAGTTCCG GCCCGAGGAC
GACCCGATCT GGGCAGTCTA CCCGCAGCGC CGCCATCTCC TCCCCAAGGT GCAGCGGCTG
ATCGAGAAGC TGCGCCGCGA GTTGCCGACC GCGCTTCTGG CAGGCTGA
 
Protein sequence
MSNRWDGIDE VVAVADTGTF VAGAKRLGTS TSHVSRAVAR LEQSLGAQLF HRTTRAVSMT 
DTGRMLVDQF RRLIAERDEA IAMLDLQGEP QGQLRITCPT ALGERFVAPI VRAYVQEYPK
LSVDLDMSNR VVELVSEGYD LAIRTGTLPD SRLIRTQIAT RGIVTCAAPS YLEERGTPQT
VDDLLGHECI PATSDVWRYR VDGEQRTIRP RGRWRCSNGA AVFDAAVAGM GLCQLPAFYV
NRAIAAGQLV PVLDEFRPED DPIWAVYPQR RHLLPKVQRL IEKLRRELPT ALLAG