| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0849 |
|---|
| Symbol | |
|---|
| ID | 3915904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 899983 |
|---|
| End bp | 900738 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640443581 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_496128 |
|---|
| Protein GI | 87198871 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0416055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGC TCGCCGCCGC ACTGCTTTTC GTGGCGGCGC CGCTTGCCGC ACAGCAAGGC
GCGCGCGGGC CGATCGTTGC CTGGACCTAT ACGGTTCAGG CGGGCGACAC CTTCTCGGGC
ATCGCCCGCC GCTGGGGCGT GGACATGGCG GCGCTTGGCG AAGCGAACGG TATTCCCAGC
CCCTACGTCA TCCGCATAGG CCAGGTCCTC AGGCGGCCGG AACTCAAGGG CTCGACTTCG
AAGCCCCGCC CCGCCCCCTC GCCCTCACCC AGCGCCACGC AAACGCCGAC GCCCAAGGCC
GTTCCCAGGC CCGCGCCATC GCCGCGACCG GCGCCTTCGC CGCGACCGCC GCTGCCCTTG
CGCGAATCCG ATGCCCCGCG CCTGCAGTGG CCTACCGAAG GGGCGGTGGT CACGCACTTC
GGGGAAAGGG TCGCCGGCAT TCCCTCGAAC GGGATCGACC TGGCCGCGCT CTATGGAACC
AAGGTGCGCG CAGCCGCTGC CGGTACGGTC ATCTATGCCG GCAAGGAGCC GGAGCGCTTC
GGCCAGCTCA TCATCATCGA CCATGGCGGC GGTTTCGTCA CGGCCTATGC CTACCTCGGC
TCGATGACCG TCAAGGAAGG CCAGATCGTG ACGGCGCGCG AACGCATCGC GCTTGTCGGC
AAGAGCGGCG AGGCGACCCG GCCGACAGTC CATTTCGAAC TGCGGCGCAA CAACGTACCC
CGCAATCCCG AACTCTACCT TCCGCCGAGG CTGTGA
|
|---|
| Protein sequence | MKRLAAALLF VAAPLAAQQG ARGPIVAWTY TVQAGDTFSG IARRWGVDMA ALGEANGIPS
PYVIRIGQVL RRPELKGSTS KPRPAPSPSP SATQTPTPKA VPRPAPSPRP APSPRPPLPL
RESDAPRLQW PTEGAVVTHF GERVAGIPSN GIDLAALYGT KVRAAAAGTV IYAGKEPERF
GQLIIIDHGG GFVTAYAYLG SMTVKEGQIV TARERIALVG KSGEATRPTV HFELRRNNVP
RNPELYLPPR L
|
|---|
| |