| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0811 |
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| Symbol | |
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| ID | 3915865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 862984 |
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| End bp | 865128 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640443542 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_496090 |
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| Protein GI | 87198833 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.251875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA AGACACTGGC AGATTGGCAG GCCGCCGCCG CCAAGGAAGT GAAGGGAAAG
GACCTGACCT GGCAGACGCC CGAGGGCATC GCCGTCAAGC CGCTCTACAC CGCCGACGAC
GTCACCGCCG ATCCGGGGCT GCCCGGCTTC GCGCCGTTCA CGCGCGGCGT TCGGGCCTCG
ATGTATGCGG GGCGGCCATG GACGATCCGC CAGTACGCCG GCTTTTCGAC CGCCGAGGAA
TCCAACGCAT TCTATCGCCG CAACCTTGCC GCCGGGCAGA AGGGCCTGTC GGTCGCGTTC
GACCTTGCGA CGCACCGCGG CTATGACTCC GACCACCCGC GCGTCGTGGG CGATGTCGGC
AAGGCGGGCG TGGCCATCGA CAGCGTCGAG GACATGAAGA TCCTGTTCGA CGGCATCCCG
CTCGACCAGA TGTCGGTCTC GATGACCATG AACGGCGCGG TGATCCCGAT CCTGGCGTTC
TTCATCGTCG CGGGCGAGGA GCAGGGCGTC GACCGCAAGC TGCTCGACGG GACCATCCAG
AACGACATCC TCAAGGAGTT CATGGTCCGC AACACCTACA TCTACCCGCC CGAGCCGAGC
ATGCGGATCA TCTCGGACAT CTTCGGCTAC ACCAGCCGCG AGATGCCGAA GTTCAACTCG
ATCTCGATTT CCGGCTATCA CATGCAGGAA GCCGGGGCGA CGCAGGTGCA GGAACTCGCG
TTCACCATCG CCGACGGCAT GGAGTACGTG AAGTACGGCG TGGCCTCGGG CCTCGACATC
GACAAGTTTG CCGGCCGCCT GTCGTTCTTC TTCGCCATCG GCATGAACTT CTTCATGGAA
GTGGCCAAGC TGCGCGCCGC GCGCGTGCTG TGGCACCGCG TGATGACGAA GCTGGGCGCG
CAGGACGAGC GTTCGAAGAT GCTGCGCACG CACTGCCAGA CCTCGGGCGT GAGCCTGCAG
GAGCAGGACC CCTACAACAA CGTCATCCGC ACCACGATCG AGGCGATGGC CGCAATGCTG
GGCGGCACCC AGTCGCTCCA CACCAACGCG CTCGACGAAG CCATTGCGCT GCCCACCGAC
TTTTCCGCCC GTATTGCGCG CAACACGCAG ATCGTGATCC AGGAAGAGAC GGGCATGTGC
AACGTGGTCG ATCCGCTCGG CGGGTCGTAC TACATCGAGG CGCTGACGCA GGAACTGGTC
GACAAGGCCT GGGAGATCAT CGAGCGTGTC GAAGCTGAAG GCGGCATGGC CAAGGCCGTG
GCGGCGGGCT GGCCCAAGGC GATGATCGAG GAAGCCGCCG CTGGCCGGCA GGCCCGCGTC
GACAGGGGCG AGGACGTGAT CGTCGGCGTC AACAAGTACC GGCTTGCCAG CGAGGACAAG
CTCGAAACGC TTGAAGTGGA CAACCACGTT GTCCGCGAGG CGCAGATCGC CCGGATCAAG
CGCGTGCGCG AAACCCGCGA CGAGACCAAG TGCCGCGCAG CGCTCAATGC CCTTACCGAA
GGTGCAAAGA CCGGCGGCAA CCTGCTTGAG CTAGCTGTCG AAGCCGCTCG CCACCGTGCG
ACGCTGGGCG AGATTTCCGA CGCGATGGAA GTCGTGTTCG GCCGCCACGG TACGTTCCCG
ACGCCGGTGA AGGGCGTCTA CGGTTCGGCA TATGCCGGAG ACAGCCGCTA CCAGCAGGTT
CTCGATGGCG TCGAGGCCGT GACGCGCCGC CTCGGCCGCA AGCCCCGCAT GCTCGTCGCC
AAGATGGGGC AGGACGGGCA CGATCGCGGT GCCAACGTGA TCGCGTCGGC CTTTGGCGAC
ATGGGCTTCG AGGTGACTAG CGGCCCGCTG TTCCAGACTC CCGAGGAGGC CGCTGCGCTG
GCGCTGGAGA AGGACGTCGA CGCCGTCGGA GCATCCTCGC TTGCCGCCGG TCACAAGACG
CTGATCCCCG AACTGATCGG CCATCTCAAG GCGGCCGGCC GCCCCGACAT CAAGGTCGTG
GCGGGCGGGG TGATCCCGCC GCAGGACTAC GACTTCCTGC GCGAAGCCGG GGTGCAGGGG
ATCTACGGCC CGGGCTCGAA CGTGGTCGAA TGCGCCGCCG ACATGCTGCG CCTGCTTGGC
CACAACATGC CGCCCGCAGG GGAGGAGCTC GAAAATGCCC AATAA
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| Protein sequence | MSEKTLADWQ AAAAKEVKGK DLTWQTPEGI AVKPLYTADD VTADPGLPGF APFTRGVRAS
MYAGRPWTIR QYAGFSTAEE SNAFYRRNLA AGQKGLSVAF DLATHRGYDS DHPRVVGDVG
KAGVAIDSVE DMKILFDGIP LDQMSVSMTM NGAVIPILAF FIVAGEEQGV DRKLLDGTIQ
NDILKEFMVR NTYIYPPEPS MRIISDIFGY TSREMPKFNS ISISGYHMQE AGATQVQELA
FTIADGMEYV KYGVASGLDI DKFAGRLSFF FAIGMNFFME VAKLRAARVL WHRVMTKLGA
QDERSKMLRT HCQTSGVSLQ EQDPYNNVIR TTIEAMAAML GGTQSLHTNA LDEAIALPTD
FSARIARNTQ IVIQEETGMC NVVDPLGGSY YIEALTQELV DKAWEIIERV EAEGGMAKAV
AAGWPKAMIE EAAAGRQARV DRGEDVIVGV NKYRLASEDK LETLEVDNHV VREAQIARIK
RVRETRDETK CRAALNALTE GAKTGGNLLE LAVEAARHRA TLGEISDAME VVFGRHGTFP
TPVKGVYGSA YAGDSRYQQV LDGVEAVTRR LGRKPRMLVA KMGQDGHDRG ANVIASAFGD
MGFEVTSGPL FQTPEEAAAL ALEKDVDAVG ASSLAAGHKT LIPELIGHLK AAGRPDIKVV
AGGVIPPQDY DFLREAGVQG IYGPGSNVVE CAADMLRLLG HNMPPAGEEL ENAQ
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