Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0760 |
Symbol | |
ID | 3918584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 809121 |
End bp | 811361 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640443492 |
Product | TonB-dependent receptor |
Protein accession | YP_496041 |
Protein GI | 87198784 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCGA AGCCAATGAC CTGTGCATTT GCGCTGGCAC TTTCATGCAC CGTTTCGCCG ATGGCGTTGG CCCAAGAAGC CTCAGCCACT CAGACTGCGT CGCAGGCTGC GAAAACCCAC GAAACCAACG CCGACATCGT CGTGACCGCG CAGCGCCGAG AACAATCGCT CCTCGACGTG CCGCTGGCGG TGACGGCGTT GGGTAGCGAT AGCCTGGCGC AGCGCGGCAT TACCAACTCG GCACAACTTG GCGATGCCGT GCCGAACCTC CAGATCAACA GCCCCTATGG CAACACGCAG CCCAACTTCT CGCTACGCGG GATCGGCGTG GCGAATGAAT ATAATTCCAA CCAGGCCTCG CCGGTCGGCG TCTATCTCGA CGATGTGTAC CTGGCGCCGC GCACCAGCCA CGGCATGGGC TTGTTCGATC TTGACCGGAT CGAGGTGCTG CGGGGGCCGC AGGGCACGCT GTTCGGTCGC AACACCACCG GCGGCGCGAT CAACTTCATC ACGAAGAAGC CCGATCTTTC GGGGACGAAT GGCTACCTGC AGGCAGGCTA CGCCAACTTC GACACCTTTA CCGCGCAGGG CGCTGCCGAA GCGACGGTGT CCGAAGACAA GCTCGGCCTG CGCGTTGCGG TGAACTACGC CAAGGGCGAT GGGCAGGTGA AGAACGTGTT CCCCGGTGGG CGCGATGCCA TGTCCACCGA CACGCTGCAG GGCCGCGTTT CTATGCGCGC GATGCCAAGC GAGGCGCTCG CCATTACGCT TCGCGCTTAT GCCGGGCGCG ATCGCGGCAC GCAGGCGGCG GTGCACGGGC TTGGCCCGTT CCGCACCGGG CTCGGCTTCT TCGAGATCAA CGAGAACCGC GTCGGAACGA ACCGCACCGA TGCCTGGGGC TTTTCGGCCA ATGTCGCGCT GGAATTGAGC GATACGCTGA GCCTCACTTC GATCACCAGC TATGACGGTG GCAGCCAGAA CCTGCAGCAG GCGGCCGATG GATCGCCGCT CGACATTCTC GATATCAACT GGCGCTCGCA ATACCGCCAG TTCAGCGAGG AACTGCGTGC CAACTACAGC GGCAACGGCG TCAACTTCGT CGGCGGCCTG TTCTATGGCT GGGACCGCAA CATCACCGAC AACACGTTCA ACCTGCCGCT GCCCCCTGCA GGCGGCTTCT TCCAACACTA CCGACAGGTA CGCAACAGCT ATGCCGTCTT CGGTCAGGCC GATATCGACG TTGCCGACAA GCTCGTGCTG ACGCTCGGCG CGCGATACAC CCACGATACC TCGCGCTACG ACGATGCCTA TGCCTACCTC TTTGTCGGTG AGGTAGGCGC GGCGCCCTTC CCGATCGCGA CAACCGTGCC CTGCACCGGC GTTGCCGGAA CCTGCGCCTA CGATCCTGCC GCGCGTTTTG CCCTGTCGGA CAAGAACAAC GCGCTGACCG GGCGCGTCGC GCTGAGCTAC ACCTTCGACA GCGGCACGCT GGTCTATGCC AGCTACAACC GTGGCTACCG CGCAGGCGCG GTCAACGGCG GCGGCTACAC CTCGTCGGCG GGCATCGGCT ACATCAAGCC CGAGCGGGTC AACGCCTATG AACTCGGCAT CAAGGGCCGC GCCGGTGGCC GGTTGCTGAC TTATGCGGCT TCTGCCTTCT ACTATGATTA CACCAACCAG CAGTTGCAGG ACACGCGCGC CGGACCGGTC TCGTTCCTCG TCAACGCGCC CAAGTCCGAA GTCTATGGCC TCGAGCTTGA AACCACGCTG CGTCCGGTCG ATGGTTTCCG CCTCGATGCT TCGGTCGGCC TGCTCCATTC GAAGTACAAG CGCCTGACGC TGCAGGGCGC GGACCTCTCG GGCAATTCCT TGCCTTTCGC TCCGCGCATG ACCGCGCAAG TCGGGTTCGA ATGGGACATG CTGCAAGTGG GCGGCGGTAC GCTGTCCTTC GCGCCGAACA TGGCCTATTC CAGCCGCCAG TATTTCTCGC CCTTCAATGC CGAGAACGCT CCGGGCACCG CACAGGTCAA CAGCGAGTTG CAGCAAGGCG CCAACGCCAA GGTCAACGCC ACGCTCAGCT GGAGCACCGA CGTGATCACC CTGCGCGCCT TTGCCAACAA CCTGTTCAAC CGCAAAACCT TCGGCTACGG CCTCGACCTT CGCGGCGCTG GCTTCCCCTA TAACTTCCTC GTGCCTTCAG CGCCGCGCAC CTACGGCGCC AGCATCCGCT ACAGCTTCTG A
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Protein sequence | MASKPMTCAF ALALSCTVSP MALAQEASAT QTASQAAKTH ETNADIVVTA QRREQSLLDV PLAVTALGSD SLAQRGITNS AQLGDAVPNL QINSPYGNTQ PNFSLRGIGV ANEYNSNQAS PVGVYLDDVY LAPRTSHGMG LFDLDRIEVL RGPQGTLFGR NTTGGAINFI TKKPDLSGTN GYLQAGYANF DTFTAQGAAE ATVSEDKLGL RVAVNYAKGD GQVKNVFPGG RDAMSTDTLQ GRVSMRAMPS EALAITLRAY AGRDRGTQAA VHGLGPFRTG LGFFEINENR VGTNRTDAWG FSANVALELS DTLSLTSITS YDGGSQNLQQ AADGSPLDIL DINWRSQYRQ FSEELRANYS GNGVNFVGGL FYGWDRNITD NTFNLPLPPA GGFFQHYRQV RNSYAVFGQA DIDVADKLVL TLGARYTHDT SRYDDAYAYL FVGEVGAAPF PIATTVPCTG VAGTCAYDPA ARFALSDKNN ALTGRVALSY TFDSGTLVYA SYNRGYRAGA VNGGGYTSSA GIGYIKPERV NAYELGIKGR AGGRLLTYAA SAFYYDYTNQ QLQDTRAGPV SFLVNAPKSE VYGLELETTL RPVDGFRLDA SVGLLHSKYK RLTLQGADLS GNSLPFAPRM TAQVGFEWDM LQVGGGTLSF APNMAYSSRQ YFSPFNAENA PGTAQVNSEL QQGANAKVNA TLSWSTDVIT LRAFANNLFN RKTFGYGLDL RGAGFPYNFL VPSAPRTYGA SIRYSF
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