Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0687 |
Symbol | |
ID | 3918112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 724842 |
End bp | 725723 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640443418 |
Product | AraC family transcriptional regulator |
Protein accession | YP_495968 |
Protein GI | 87198711 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.50177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCGAGG ACTGTTCAGT CCGGGTCCGT TTTCATCAGC CGCCGCCGCG GCTCGCCCGC TATTTCACTA CGTTCTATCT TACCGAGCTC GATGTCCCGG GTGGTGGTCG CGTTACCGAC CATCTTCATC CAGAATGGGC AAACCTGCGC TTCTGCCAGG GCGACCTTCC CGAATCAGAG CTGCCCGGCG CTCCGCCAAT GAGCGGCGTT TCGACAATCG CGACCGGCCC CACCAGCACG ACCTTGCGCT TTACCGTCGG CACGACCCGG ATTTGGGGCG TCGGCCTCCT GCCGCTCGGC TGGGCGCGCT TCGTCCAGGC TGACGCCCAC CTTCATGCCG ACCGCGTGTA CGATGTGGAG GCGGAACCTT TCCTGTCGTC TTTCCGTAAG CTTGGGCGAG GCGTCTTTGC AGGCAATCCC GACGAAGCAG GGGAATTGGA TCGCATCACC GCGTTTTTCG AGCGCGCGCT CGATAATCTC CTCGACGACG ACCCGCGCAT CCTCGCCTGC CACGCGGCGC TGGTGGATGC GGAAGTATCG ACCGTGAGTG AAATGGCCGA GGCCGCGCGC TTGCCAGCGC ACACGCTGGA GCGGATCTGC CGCCGCAACT TCGGCTTCAC GCCGCGCCTG TTGCTGCGCC GCCAGCGCTT CATGCGCAGC CTCGTCCAGT ACATGATGGA CCCGTCGCTG CGCTGGATCG GCGCGATCGA CAGCCATTAC CATGACCAGG CCCAATTCGT GCGCGACTTC CATCGCTTCA TGGGTATGAG CCCGCGCGAA TATGCCGGCC AGCCCAAGCC GGTGTTGCAG GAAGTCATGC GCGCGCGGCA GGCGTTCGTC GGCGCGGCGG TCCAGGCGCT CCATGCGCCG GGGCGCGGAT AA
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Protein sequence | MIEDCSVRVR FHQPPPRLAR YFTTFYLTEL DVPGGGRVTD HLHPEWANLR FCQGDLPESE LPGAPPMSGV STIATGPTST TLRFTVGTTR IWGVGLLPLG WARFVQADAH LHADRVYDVE AEPFLSSFRK LGRGVFAGNP DEAGELDRIT AFFERALDNL LDDDPRILAC HAALVDAEVS TVSEMAEAAR LPAHTLERIC RRNFGFTPRL LLRRQRFMRS LVQYMMDPSL RWIGAIDSHY HDQAQFVRDF HRFMGMSPRE YAGQPKPVLQ EVMRARQAFV GAAVQALHAP GRG
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