Gene Saro_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0684 
Symbol 
ID3918109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp723040 
End bp723945 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content64% 
IMG OID640443415 
Producthomoserine O-succinyltransferase 
Protein accessionYP_495965 
Protein GI87198708 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.965727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGATCA GGATTGCCGA CAATCTCCCC GCCCGCCGCA CGCTGGAAGC CGAGGGCGTG 
ATCGTGATGA GCGAGACCGA GGCCGCACGC CAGGACATCC GGCCGATGCG CATCGCCCTT
CTCAACCTGA TGCCCGACAA GATCACCACC GAAACGCAGA TCGCCCGTCT TCTCGGCGCG
ACGCCGCTGC AGGTGGATCT CGAACTGGTC CGCATTTCCG ACCACGTCAG CAAGAACACC
TCGGCGGGGC ACATCTCGGC CTTCTACCGT CCGTGGGATG ACGTCCGCGC CGAGAAGTAT
GACGGCCTGA TCGTCACCGG CGCGCCGGTC GAGACGATCC CATACGAGGA AGTGAGCTAC
TGGGACGAGT TGCGGCGCAT TTTCGACTGG TCGCAGAGCA ACGTTCACCG CACTCTGTCG
GTCTGCTGGG GCGCCATGGC TGCGCTCTAT CACTTCCATG GCATCGAAAA GCACGGCCTG
CCGACCAAGG CGTCCGGCGT GTTCCGTCAT GTCAATCATG CCCCCGCGAG CCCGTGGATG
CGGGGTTTGC CCGACGTGTT CGACGTGCCC GTCTCGCGCT GGAGCGAGGT CCGCCGCGAG
GACCTGCCCG AAGGGCGGGG CTTGTCGGTG CTGGCCGACA GCGCCGAGAC CGGGCTGTGC
CTGATTGACG ATCCGGCCAT GCGCACGCTG CATATGTTCA ACCATCTCGA GTACGACACG
CTCACCCTTG CAGGCGAATA TGCGCGGGAT GAAGGCAAGT ATCTTCCGCG CAACTATTTC
CCCGGCGATG ACCCGCAGGC GATGCCTGCC AACACGTGGC GTGGCCACGG GCACCTGCTG
TACGGCAACT GGATCAACGA GACGTATCAG ACGACGCCAT ACGATCTCGC AGACATTGGA
AGGTAA
 
Protein sequence
MPIRIADNLP ARRTLEAEGV IVMSETEAAR QDIRPMRIAL LNLMPDKITT ETQIARLLGA 
TPLQVDLELV RISDHVSKNT SAGHISAFYR PWDDVRAEKY DGLIVTGAPV ETIPYEEVSY
WDELRRIFDW SQSNVHRTLS VCWGAMAALY HFHGIEKHGL PTKASGVFRH VNHAPASPWM
RGLPDVFDVP VSRWSEVRRE DLPEGRGLSV LADSAETGLC LIDDPAMRTL HMFNHLEYDT
LTLAGEYARD EGKYLPRNYF PGDDPQAMPA NTWRGHGHLL YGNWINETYQ TTPYDLADIG
R