Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0612 |
Symbol | |
ID | 3915624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 658339 |
End bp | 659421 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640443342 |
Product | ABC transporter, periplasmic substrate-binding protein |
Protein accession | YP_495893 |
Protein GI | 87198636 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0367247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCACGC TGATTGGCAA GCTCGGTATG ACGGGTCTGT TCGCGGGGGC GTTGCTGATC GCATCCTGCT CACCCTCTGG TGCGCCCCAT GCCGAACCCC GCAAGGAGTT CAGCATAGGC TGGTCGATCT ATGCGGGATG GATGCCCTGG CCCTATGCCC AGCAGGCCGG CATCGTGAAG AAGTGGGGCG ACAAGTACGG CATCAGGATC AACGTCGTAC AGGTCAACGA CTACGTCGAA TCCGTAAACC AGTACACCGC AGGCAAGTTC GACGGCGTGA CCGTCACCAA CATGGACGCG CTGACCATTC CCGCCGCGGG CGGCAAGGAC ACGAGCGCGA TCATCGTCGG CGACTATTCC AACGGCAATG ACGGCATCCT GCTGAAGGGC GGCAATTCGC TTGCCGACAT CAAGGGGCGC GAAACATATC TGGTCGAGCT TTCGGTGTCC CACTACCTGC TCGCCCGCGG GCTGGAAAAG GCGGGTCTGA AGCCGACCGA CGTCAGGACC GTGAACACCT CCGACGCCGA TCTCGTCAGT GCGTTCAGCG CGCCTGACGT GACCGCCGCG GTCACCTGGA ACCCGCAGCT CTCGGTGATG AAGGCTCAGC CCGGCGTCAC CCAGGTCTTC AGTTCCGCCG ACATTCCGGG CGAGATCGTC GACCTTCTGG TGGTCGATAC CGCCACGCTC AAGGCCAATC CCGATCTCGG CAAGGCGCTG GCAGGCATCT GGTACGAAAC CGTCGCCCTG ATGCAGCGGC AGGACGAACA GGGCAAGGCT GCGCGGGCCG CCATGGCCAA GCTCTCGGGC TCGACCCCGC AGGCGTTCGA CAGCCAGCTC AAGACAACGT TCCTCTATGG CGAACCCAAG GCCGCCGTCG ACGCCGCCAC CGCGCCCGCG CTCGTGACGA CGATGACCAA GGTCCGCGAT TTCAGCTTCT CGAAGGGCTT GTTCAAGGGC GCCGCCTCGG CCGATGCGGT CGGCATGGCC TTCCCCGGCG GCAAGACCCT TGGCGATCCG CAGCACGTCA CCCTGCGCTT CGACGAAAGC TTCATGAAGC TGGCCGCCGA CGGCAAGCTC TGA
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Protein sequence | MVTLIGKLGM TGLFAGALLI ASCSPSGAPH AEPRKEFSIG WSIYAGWMPW PYAQQAGIVK KWGDKYGIRI NVVQVNDYVE SVNQYTAGKF DGVTVTNMDA LTIPAAGGKD TSAIIVGDYS NGNDGILLKG GNSLADIKGR ETYLVELSVS HYLLARGLEK AGLKPTDVRT VNTSDADLVS AFSAPDVTAA VTWNPQLSVM KAQPGVTQVF SSADIPGEIV DLLVVDTATL KANPDLGKAL AGIWYETVAL MQRQDEQGKA ARAAMAKLSG STPQAFDSQL KTTFLYGEPK AAVDAATAPA LVTTMTKVRD FSFSKGLFKG AASADAVGMA FPGGKTLGDP QHVTLRFDES FMKLAADGKL
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