Gene Saro_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0588 
Symbol 
ID3915600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp633608 
End bp634627 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID640443318 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_495869 
Protein GI87198612 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.115132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCG TTTCCGGTAT CCAGCCCACG GGCAATCTCC ACCTCGGCAA CTACCTGGGT 
GCGATCCGGA ACTGGGTGCG CATGCAGGAC GAGTGGTCGG CCAAGGGCGG AGAATGCCTC 
TATTTCCTGG CGGACCTCCA TGCCATCTCC ATGCCGCACA GCCCCGCCGA ACTCGCCGCC 
AACACGCGTG AGATGGTGGC GGCGCTGGTT TCCTGCGGAA TCGATCCCGA CAAGTCCGTC 
CTGTTCAACC AGGCGCAGGT CCCGGCCCAT GCGGAAATGC AGTGGCTGCT GAACGGCACG 
GCCCGCATGG GCTGGCTGAA CCGCATGACG CAGTGGAAGG ACAAGGCTGG CAAGAACCGC 
GAGGGCGCCT CGGTCGCGCT GTTCACCTAT CCGGTGCTCC AGGCCGCCGA CGTGCTGCTT 
TACCAGGCGA CGCACGTTCC GGTGGGCGAA GACCAGAAGC AGCACCTCGA ACTGGCCCGC 
GACGTGGCGC AGAAGTTCAA CAACGACTTC GCGTCGGAAG ATGCGCCGGT GTTCACGCTG 
CCCGATCCGA TCATCCCGCC CGAGGCCGCG CGAATCATGT CGCTGCGCGA CGGTTCGGCC 
AAGATGAGCA AGTCCGACCC TTCGGACATG AGCCGCATCA ACCTGACCGA CGATGCCGAT 
GCGATCATGC AGAAGGTCAG GAAGGCCAAG ACCGATCCCG AGCCGCTGCC GGGCACGATG 
GAAGGGCTTG CGGGGCGTCC GGAAGCGAAC AACCTCGTCG GCATCTACGC AGCCATGGCG 
GGCATTTCGC CCGCCGATGT GCTCGCCCGG TTCGAGGGCC AGGGCTTCGG CCAGTTCAAG 
CCGGCGCTTG GCGAACTTCT GGTCGAGAAG CTTTCGCCGA TGGCCGCGCG CTATCGCGAA 
CTGCGCGAGG ACCGGGCCGC GCTCGACGCG ATCCTTGCCA AGGGTGCGGA AAAGGCGCGC 
GCCCTGGCCG CCCCCACGCT GGCGCGGACC TATGACGCGC TGGGTCTCGT AAGAGGCTGA
 
Protein sequence
MRIVSGIQPT GNLHLGNYLG AIRNWVRMQD EWSAKGGECL YFLADLHAIS MPHSPAELAA 
NTREMVAALV SCGIDPDKSV LFNQAQVPAH AEMQWLLNGT ARMGWLNRMT QWKDKAGKNR 
EGASVALFTY PVLQAADVLL YQATHVPVGE DQKQHLELAR DVAQKFNNDF ASEDAPVFTL 
PDPIIPPEAA RIMSLRDGSA KMSKSDPSDM SRINLTDDAD AIMQKVRKAK TDPEPLPGTM 
EGLAGRPEAN NLVGIYAAMA GISPADVLAR FEGQGFGQFK PALGELLVEK LSPMAARYRE 
LREDRAALDA ILAKGAEKAR ALAAPTLART YDALGLVRG