| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0581 |
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| Symbol | |
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| ID | 3915593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 627580 |
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| End bp | 628707 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640443311 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_495862 |
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| Protein GI | 87198605 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.680439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC TTGATCCCGT CGTCCTGGCC GAACGGCTGA TCGACTGCCC CAGCATCACG
CCGGCCACCG GCGCGGTTTT CGATTGCCTC CAGGCCATGC TCGAACCGCT CGGTTTCGCG
ATCCACCGCT TCGTCGCGGG CGAAGCGCCC GACGGTCCGG TCGAGAATCT CTTCGCCATC
CGCAAGGGCC CCGAAGGCGC GCGCCACTTC GCCTTTGCCG GCCACCTTGA CGTCGTCCCG
CCAGGCGAGG GCTGGACGTC CGGCCCGTTC AAGGCAGAGC GCCGGGGCGA ACTGCTCTAC
GGGCGCGGCG CGGTCGACAT GAAGGGTTCG ATCGCCGCGA TGGTCGCAGC CGTGGCCGAA
ATTCCGGCGG ACGCGGGCAC GCTCAGCTTC ATCATCACCG GCGACGAGGA AGGCCCCGCC
CGCTACGGCA CCGTCCCCCT CATCGACCTC ATCCGCCAGC TCGGGGCCGA GCCGGACCTT
TGCCTGGTGG GCGAGCCCAC GTCGGTCCAC CGCCTGGGAG ACATGGTGAA GATCGGGCGG
CGCGGTTCGG TCAACATGTG GATCGCCTGC AAGGGCGCGC AGGGCCATGT CGCCTATCCC
CACCTGGCCG ACAACCCGAT CCCCCGCCTC GTCGCGCTGC TGGCAGATCT CGATGCGCTC
GTGCTCGACG GCGGCACCGA GTGGTTCCAG CCTTCCAACC TCGAGATCAC CGACCTCGAG
GTCGGCAATC CCGCCACCAA CGTCATCCCC GCCGAAGCCC GCGCGCGCAT CTCGATCCGC
TTCAATGACC GCCATACCGG CGCCGAGCTG GTCGCCAGGG TCGAGGAGAT CGCCCATCGC
CACAAGGGCG AGGTCCGCGC GGTCATCTCG GGCGAGAGTT TCATCACCCT GCCCGGCGCC
TTTTCCGCGA TGATCGCCGA TGCGGTGAAG GCCGAAACCG GGCTCGATCC CGAACTGTCC
ACCAGCGGCG GCACGTCCGA CGCTCGCTTC CTGCGCGCGG TCTGCCCGGT CGTCGAGTTC
GGCCTGTGCA ACGCCACGAT GCACAAGAAG GACGAGGCCG TCGCTATGGA AGACCTCCGC
GTCCTCCAGC GCATCTACCG GCGGATTGCC CTCAGCGCCC TTTCCTGA
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| Protein sequence | MTDLDPVVLA ERLIDCPSIT PATGAVFDCL QAMLEPLGFA IHRFVAGEAP DGPVENLFAI
RKGPEGARHF AFAGHLDVVP PGEGWTSGPF KAERRGELLY GRGAVDMKGS IAAMVAAVAE
IPADAGTLSF IITGDEEGPA RYGTVPLIDL IRQLGAEPDL CLVGEPTSVH RLGDMVKIGR
RGSVNMWIAC KGAQGHVAYP HLADNPIPRL VALLADLDAL VLDGGTEWFQ PSNLEITDLE
VGNPATNVIP AEARARISIR FNDRHTGAEL VARVEEIAHR HKGEVRAVIS GESFITLPGA
FSAMIADAVK AETGLDPELS TSGGTSDARF LRAVCPVVEF GLCNATMHKK DEAVAMEDLR
VLQRIYRRIA LSALS
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