Gene Saro_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0395 
Symbol 
ID3918279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp431793 
End bp433526 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content64% 
IMG OID640443124 
Productpotassium efflux system protein 
Protein accessionYP_495677 
Protein GI87198420 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCCAC ATCCGGGAAT CCCTTTTCTT CGAGAAGCGC TCGTTCTGCT TGCCGCTGCC 
GGGCTTGCGG TTCCGCTGCT GAACCGGATC CGGGTAAATC CGATCCTTGG CTATCTGTTG
ATCGGCGGTG TGATCGGGCC ATACGGGCTT GGGTTGCTTG CGGCTGACTA TCCGTTCCTT
TCGCACGCGG TCATTTCCGA TATCGCCGGT GTTCGCGGGC TGGCCGAGAT CGGCGTGGTT
TTCCTGCTGT TCATGATCGG CCTGGAACTC TCGCTGGAAC GGCTATGGTC GGGCCGCGCC
CTCGTGTTTG GCATGGGATC GCTCCAGATT CTGCTGACGG CCGGTCTGAT CGCCTGGATC
GCGACAGGTC TTGGTGTGGA GGAGCCCACC GCCCTGATCG TCGGGGCAGC ATTGTCCTTG
TCGTCGACCG CGATCGTCAT GCAGCTGCTC ATTCACGGGC GCCGCCAATT TTCCGCGGTC
GGGAAGACCG GCTTTGCCAT CCTGCTGATG CAGGACCTGG CGGTGGTGCC AATTCTCTTC
ATGGTCGGCG TGATTGCGAC CCCGGGCAGC GGTGGTCTCG CTGCCGGCCT GGCGGGGGCG
TTGGGGAAGG CGACACTGGC GATCGTTCTG ATCTATCTGG CCGGACGCCT ATTGTTGAGG
CCGGTACTGC GCCAGGTGGC GCAGACGCGT AGCCCGGAAA TGTTCACCGC CGCGGTACTG
CTGACCGTCA TCGGGGTCTC AGCGTTGACC GCCCGGTTCG GACTGTCCAT GGCGCTGGGC
GCCTTTCTCG CCGGGCTGCT GTTGGCCGAG ACCGAATACC GCCATCAGAT CGAAGTCGAC
ATCGAGCCTT TCAAAGGCCT CCTGCTGGGG CTTTTCTTCA TGTCGGTCGG CATGGGCATC
GACTGGCGTC AGGTTCTCGC CAGTCCGCTC GAGATTGCCG GGATGGTCAC CGGGCTCTGG
CTGCTGAAGG CCGTGGTCAT TACGGGATTG GCCATCGCCT TCGGCAGGCC GCGGCATGTC
GCTGCGGAAG CCGGGATGTT GCTGGGCCAG GGCGGCGAAT TCGCCTTTGT CATCGTTGGG
GTTGCAGCGG GCCTCGGTGT TGTTGGCGGC GTCCTTGAGC AACAAATCCT GATTGTCACC
GGCATCAGCA TGCTGCTGAC CCCGGTGGTC GCACATCTGG CTCGGCAGCT TTCTGCGGCA
ATGGAGCGCA AGCGTCTCGC AGCCGCGGCT GACACCGATG AGAGCTTCGC CGATTGCGAA
GGTCATATCA TCATCGCCGG ATTTGGACGG GTCGGCCAGA CTTTGGCCCG CGCGCTGGAT
GCGGAAAACG TGGCCTTTGT TGCGCTCGAT GCCGATGCGG CCATGACCGC AGGCCTGAAG
GATCGGCACC TGCCGGTATT CTACGGCGAT GCGTCGCGCA GCGAAATCCT GGCCAAGGCG
GGAATAGATC ATGCCGCAGC CGTCGTCGTG ACGATGAACG ATCCGGAAGC TGCCAGCCGG
ATTGTTCACC AGATACACCA GCGGTGGCCA TCAATGCCGA TCCACGCCCG GGCCAGGGAT
CCGGAGCACG CCCGCCGTCT CCTCGAACTG GGCGCCAGTT TCTGCACCCC GGAGACGGTC
GAGGCGAGTC TCCAGCTCGC CGCCAATGTC CTGGTGGGCG CCGGCGTGGA CGCCGAAGTG
ACCCGGCGCA GGATCACCGA GCAGCGCGCC TATGAAACAG GTGACAGCCC TTGA
 
Protein sequence
MEPHPGIPFL REALVLLAAA GLAVPLLNRI RVNPILGYLL IGGVIGPYGL GLLAADYPFL 
SHAVISDIAG VRGLAEIGVV FLLFMIGLEL SLERLWSGRA LVFGMGSLQI LLTAGLIAWI
ATGLGVEEPT ALIVGAALSL SSTAIVMQLL IHGRRQFSAV GKTGFAILLM QDLAVVPILF
MVGVIATPGS GGLAAGLAGA LGKATLAIVL IYLAGRLLLR PVLRQVAQTR SPEMFTAAVL
LTVIGVSALT ARFGLSMALG AFLAGLLLAE TEYRHQIEVD IEPFKGLLLG LFFMSVGMGI
DWRQVLASPL EIAGMVTGLW LLKAVVITGL AIAFGRPRHV AAEAGMLLGQ GGEFAFVIVG
VAAGLGVVGG VLEQQILIVT GISMLLTPVV AHLARQLSAA MERKRLAAAA DTDESFADCE
GHIIIAGFGR VGQTLARALD AENVAFVALD ADAAMTAGLK DRHLPVFYGD ASRSEILAKA
GIDHAAAVVV TMNDPEAASR IVHQIHQRWP SMPIHARARD PEHARRLLEL GASFCTPETV
EASLQLAANV LVGAGVDAEV TRRRITEQRA YETGDSP