Gene Saro_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0388 
Symbol 
ID3918272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp426165 
End bp426689 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID640443117 
ProductOmpA/MotB 
Protein accessionYP_495670 
Protein GI87198413 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTA CGCTTGCCCT TGCACTCCTC GCCTCCGGTG CGCTGGCCCT TTCCGCCTGC 
GGCCAGAAGC GCGCCCCTGA ATCGCTCCCG CCCGAGCCTG GCCCGCAGGC GCCCGTGGCT
GCCAATAACG GAGATTACGA CGCCAACGGC AACTATATCG GTCCGGGCAG CCAGGCCGAC
CTGCGGCGCA CGGCCGGCAG CGACCGGGTC TTCTTCGATT TCGATTCCTA TGGTCTCGAC
GATACCGACC GGGCGACCCT TACCCGCCAG GCTTCCTGGC TGGCGCAGTA TCCGAACGTG
AATGTCACGA TCGAGGGCCA TGCCGACGAA CGCGGCACCC GGGACTATAA CCTTGCGCTG
GGCGAACGGC GCGCCAACGC CGCGAAGAAC TTCCTGGCTT CACTCGGAGT CGCAACGACC
CGCATGTCGG TGGTCTCCTA CGGCAAGGAG CGTCCGGAGG CGCTGGGTTC GGATGAGCAG
TCCTGGGCCC AGAACCGCCG CGCGGTCACG ATGGTGATCC GCTGA
 
Protein sequence
MKRTLALALL ASGALALSAC GQKRAPESLP PEPGPQAPVA ANNGDYDANG NYIGPGSQAD 
LRRTAGSDRV FFDFDSYGLD DTDRATLTRQ ASWLAQYPNV NVTIEGHADE RGTRDYNLAL
GERRANAAKN FLASLGVATT RMSVVSYGKE RPEALGSDEQ SWAQNRRAVT MVIR