| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0360 |
|---|
| Symbol | |
|---|
| ID | 3918244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 397143 |
|---|
| End bp | 397844 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640443089 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_495642 |
|---|
| Protein GI | 87198385 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTGC GCCGTCCGTT TCGCGCCCTC TGCTGTGCTC TTGCCTTGCT GGCTGCCGAA
CCTGCCTTGC CGCAGCCGGT TGCCCAGCAG GCAGAGCAGC AGCGGGTCGA CATTGCCGCT
CACATCACCG AAGCATCGCA GCGGTTCGGC ATTCCCGATC ACTGGATCTA CGCGGTCATG
CGGGTGGAGA GCGCGGGGCG GATCGGTGCA GTCTCGTCAG CAGGGGCGAT GGGCTTGATG
CAACTGATGC CCGGAACCTG GGCGCGTCAG CGCGTCCGGT TCGGCCTCGG CGCCGACCCG
TTCGATCCGC GCGACAACAT CATGGCGGGC ACCTCATACC TGCGAGAAAT GTACGACAGC
TACGGCGCGC CCGGCTTTCT CGCCGCTTAC AATGCGGGAC CGGGCCGCTT TGAGGACTGG
CGCGACAAAG GCCGTCCCTT GCCTGCCGAA ACCCGCGCCT ATGTCGCCCG GATCGCACCG
ATGCTGCAAA TCGGCAGCAC GCCAGCTGTC ATGGCTGCTG CATCCTCCGT GCAGCCGGTG
CGCCCCTCCT GGACACAGGC GGCGCTCTTC GCAGCCCGCG CAAATGCCGT GGAGGAAACG
CCAGGTTCTG CCACTCGCGC GGTGGCATCC GATCCGCTCC TAGCTTCACC CCGCCCGCTC
AGCACGCTCT TCGCGCCCGT CGTCGGAAGA CGGTCACAAT GA
|
|---|
| Protein sequence | MSLRRPFRAL CCALALLAAE PALPQPVAQQ AEQQRVDIAA HITEASQRFG IPDHWIYAVM
RVESAGRIGA VSSAGAMGLM QLMPGTWARQ RVRFGLGADP FDPRDNIMAG TSYLREMYDS
YGAPGFLAAY NAGPGRFEDW RDKGRPLPAE TRAYVARIAP MLQIGSTPAV MAAASSVQPV
RPSWTQAALF AARANAVEET PGSATRAVAS DPLLASPRPL STLFAPVVGR RSQ
|
|---|
| |