| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0320 |
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| Symbol | |
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| ID | 3915562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 344157 |
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| End bp | 346142 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640443049 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_495602 |
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| Protein GI | 87198345 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0236522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCAA CACGTATTCT CTGGGGTCAA ATCGCAGTCG TGCTGTTTAT CGTGGTCTTG
GGCGTCTGGG GAGCGACCCA ATGGACGGCT GCGGCCCTCG GGTATCAGCC CGAATTGGGG
GAACCAATCG GCTACGCCTT CGGTCGTCCG GTATATCCGC CGCCTGCGAT TTTCTGGTGG
TGGTTCAGTT TCGAAGCCTA TGCCCCGCAG ATCTTCGAAA CCGGCGGACT GATTGCTGCT
GCCAGCGGAT TGGTTGCCGT AGCTGCCGCG ATCGCCATGT CCGTCTGGCG CGCGCGCGAA
TTGAAACGGA CCGAGACCTT TGGCTCCGCG CGATGGGCAG ATCGGGCCGA GGTTGCTGCC
GCCGGGCTGC TGGGTGACCA TGGCGCTGTC CTTGGCCATT ACGAACACAG CTATCTGCGA
CATGACGGTC CGGAGCACGT TCTCTGCTTC GCGCCGACCC GCAGCGGCAA GGGCGTCGGG
CTTGTCATCC CGACCCTGCT GACCTGGCCG GCCTCGGCCA TCATCCACGA CATCAAGGGC
GAGAATTGGA ACCTCACTGC CGGTTTCCGC TCGACGTTCA GCCGGGTGTT GCTGTTCGAT
CCCACAAACG CCAATTCGGC GGCCTACAAT CCTTTGCTGG AAGTCCGGCG CGGTGTGGCC
GAGGTCCGAG ACGTTCAGAA CATCGCAGAC GTCCTGGTCG ATCCCGAAGG TTCGCTCGAA
CGCCGCAATC ACTGGGAAAA GACCAGCCAC TCCCTGCTCG TCGGCGCGAT CCTGCATGTG
CTCTATGCCG AACCGGACAA GACCCTGGCC GGCGTGGCAG CCTTCCTATC GGACCCCCGC
CGCACCATCG AGGCGACGCT GACTGCCATG ATGGCAACGC CGCATCTGGG AAAAGCCGGT
GTTCATCCGG TTGTCGCCAG CGCTGCCCGC GAACTGCTCA ACAAGTCCGA GAACGAGCGA
TCCGGCGTTC TGTCGACGGC CATGTCGTTT CTTGGCCTCT ACCGCGACCC GGTTATCGCG
GAGGTCACCC GGCAATGCGA TTGGCGGATC ATGGACCTGG TGTCGGGTAA GCAGCCGGCG
ACTCTCTACC TCGTGGTGCC ACCGTCCGAC ATCAGCCGGA CCAAGCCGCT TATCCGTCTG
ATCCTCAATC AGGTCGGGCG GCGCCTGACC GAAGAACTTG AGGCCGACAG CAAGCGGCAC
CGCGTCCTGC TGATGCTGGA CGAGTTCCCC GCGCTGGGAC GGCTCGATTT CTTCGAGAGC
GCGCTGGCCT TCATGGCGGG CTATGGCCTC AAGGCTTTTC TGATCGCCCA GTCGCTGAAC
CAGATCGAGA AGGCCTATGG CCAGAACAAT GCCATCCTCG ACAATTGCCA TGTCCGGGTT
TGCTTCGCTA CGAACGACGA GCGCACCGCC AAGCGGGTTT CGGACTCGCT GGGCACGGCC
ACGGAACTGC GGGCGATGAA GAACTACGCC GGGCACCGCC TGTCGCCCTG GCTTGGCCAC
CTGATGGTGT CGCGCTCCGA AACGGCCCGG GCCTTGTTGA CGCCGGGCGA GATCATGCAG
CTACCGCCGG ATGACGAGAT CGTGATGCTG GCCGGGCTGC ATCCGATCCG GGCGAAGAAG
GCGCGCTATT TCAAGGATCG ACGACTAAGC GCCCGCATTC TGCCGCCACC GGAATGTCGT
AAGGCCCAAC CGAATATCGC AAATGCCGGT GCCTGGGCGG ATATGATTGT CCAGTCGCCA
ACAGCACAGA GGCACCGGTC ACCGACGGAC GACGACGATT GTGACGCGGA CAATGGCGGT
ATCAGGCGGG AGCCGGAACT GCCGGAGCAT GAGGAGATCG TCCTCCCCCC GCGCCTGGTC
AGCGAATTCG AGTTTGAGGA ACCGATGATC GAGGAAGACC TGGCGCAGAG CCGGCAGCAA
GCTGACCGCA TTTGGACCGT TGCCCGGCAG GCGGCGCTTG ACCCTGGCGA CGGGATCGAA
CTGTGA
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| Protein sequence | MSATRILWGQ IAVVLFIVVL GVWGATQWTA AALGYQPELG EPIGYAFGRP VYPPPAIFWW
WFSFEAYAPQ IFETGGLIAA ASGLVAVAAA IAMSVWRARE LKRTETFGSA RWADRAEVAA
AGLLGDHGAV LGHYEHSYLR HDGPEHVLCF APTRSGKGVG LVIPTLLTWP ASAIIHDIKG
ENWNLTAGFR STFSRVLLFD PTNANSAAYN PLLEVRRGVA EVRDVQNIAD VLVDPEGSLE
RRNHWEKTSH SLLVGAILHV LYAEPDKTLA GVAAFLSDPR RTIEATLTAM MATPHLGKAG
VHPVVASAAR ELLNKSENER SGVLSTAMSF LGLYRDPVIA EVTRQCDWRI MDLVSGKQPA
TLYLVVPPSD ISRTKPLIRL ILNQVGRRLT EELEADSKRH RVLLMLDEFP ALGRLDFFES
ALAFMAGYGL KAFLIAQSLN QIEKAYGQNN AILDNCHVRV CFATNDERTA KRVSDSLGTA
TELRAMKNYA GHRLSPWLGH LMVSRSETAR ALLTPGEIMQ LPPDDEIVML AGLHPIRAKK
ARYFKDRRLS ARILPPPECR KAQPNIANAG AWADMIVQSP TAQRHRSPTD DDDCDADNGG
IRREPELPEH EEIVLPPRLV SEFEFEEPMI EEDLAQSRQQ ADRIWTVARQ AALDPGDGIE
L
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