Gene Saro_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0296 
Symbol 
ID3916233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp318701 
End bp319504 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content65% 
IMG OID640443025 
ProductABC transporter related 
Protein accessionYP_495578 
Protein GI87198321 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGAGA ACGACAGAGC CCCGCCGATG ACACTCACCG AAGAAGCCCC CGCTGCCGTC 
AATGCCGCGC CGCCGATTCC GCAAGGCGGG CTCGAGGTCG TGTCCATTGC CAAGTCCTAC
GACAAGCGCG CGGTGCTTAC CGATATCTCG CTTTCCGTGG GCAAGGGCGA AGTGCTGGGC
CTGCTCGGGC CCAACGGCGC CGGCAAGACG ACGTGCTTCT ATTCGATCAT GGGTCTCGTC
CGTCCGGATT CGGGGCGCAT CCTTCTCGAT GGCGTCGATA TCACCAAGCT GCCGATGTAC
CGCCGCGCGA TCCTCGGGCT GGGCTACCTG CCGCAGGAAA CCTCGATCTT CCGGGGCATG
ACGGTCGAGC AGAACATCTC GACCGTGCTC GAACTGATCG AACCGGACAA GGCCACGCGC
GAGGCGGAAC TTGAACGGCT GCTCGACGAA TTCGGCCTGG CGCGGCTGCG CTCCAGTCCG
GCGATGGCGC TTTCCGGCGG TGAGCGCCGC CGCTGCGAAA TCGCCCGTGC CCTTGCCGCG
CGGCCTTCGA TCATCCTGCT CGACGAACCT TTCGCCGGCA TCGACCCGCT TTCGATCAGC
GACATCCGGC ATCTGGTGAA GGATCTCAAG GGGCGCGGCA TCGGCGTCCT CATCACCGAC
CACAACGTGC GCGAGACGCT CGACATCGTC GACCGTGCCT GCATCATCTA TGGCGGGCAG
GTGCTTTTCG CGGGCAGCCC GGAAGCGCTC GTGGCCGATG CCAACGTGCG GCGGCTCTAT
CTGGGTGAAG GCTTCACCCT GTGA
 
Protein sequence
MLENDRAPPM TLTEEAPAAV NAAPPIPQGG LEVVSIAKSY DKRAVLTDIS LSVGKGEVLG 
LLGPNGAGKT TCFYSIMGLV RPDSGRILLD GVDITKLPMY RRAILGLGYL PQETSIFRGM
TVEQNISTVL ELIEPDKATR EAELERLLDE FGLARLRSSP AMALSGGERR RCEIARALAA
RPSIILLDEP FAGIDPLSIS DIRHLVKDLK GRGIGVLITD HNVRETLDIV DRACIIYGGQ
VLFAGSPEAL VADANVRRLY LGEGFTL