| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0250 |
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| Symbol | |
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| ID | 3917601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 260029 |
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| End bp | 262320 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640442977 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_495532 |
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| Protein GI | 87198275 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGGT TTTCGCAAAA GCATAAGCTG ATGGCTGTGC TGGCTGCTAC GACATACCTC
TTTGCATTGC CGGTTGTGGT GCGGGCGCAG GCTGCCGATC AATCGACGGG CCAGTCGGCA
GGCCGAGCCG ATGGCGGGCT GGGCGAAATT GTCGTGACCG CGCAGCGGCG CCAGCAGAAT
GTCCAGGATG TGCCGATCGC GATCACGGCC GTCACCGGCG AAGCGCTGCG GGATTCCGGC
GTGCGCGATC CGCGCGACCT GACCCTGCTG GTGCCCAGCC TTTCGATGCA GGCTGGCACC
GCGGCCTCCA CCACATCGCT GTTCATCCGC GGTGTCGGCA TCGGCGACTT CAATTCCAAC
ACCACCGGCG CGGTGGGCGT CTACGTCGAT GACGTGTTCC TCGGCGCCAA CGCGGGCAAG
CTGTTCAACG TGTTCGACAG CGAGGGTATC GAGGTGCTCA AGGGGCCGCA GGGCACGCTC
TATGGGCGCA ATACCACCGC CGGCGCGATC CGCTTCAGCT CGCGCAAGCC GACCGATACG
CTGAGCGGCG ATGTCTCGGC GCTCTATGGC CGTTTCAACG AGGTCCGCAT TGAAGGCGGC
GTCGGCGGTC CGATTGCGGG CGACGTGCTT ACCGCGCGCA TCTCGGGCCT CTATCACCGC
AACGATGGCA CGACCTTCAA TCGCGTGACC GGCCACCGCG TCAACAACAT CAACCTCTGG
GCCGGGCGCG GCATTCTCGA TTTCAAGCCC GACGCGGATA CGCTGGTGCG GCTGACGGTG
CACGGCGGCG CGAACAACGG CGGCGCGCGC CAGTTCCAGC ATCGTGGCCA GGGCGTCGAC
TTCTTCGGCG ATCCCGCATT CCTGCCCGAT GGCACGCCGA CCGACGGGTT CGGCTATGCC
GATACCGACG GCGATCCCTA TGCCGGGGAC TACGACGTCG AGGGCAAGGA GCGCATCCGC
GTGTTCGGCG CCTCGCTGCT GGGCCAGTTC ACCTTCGGCG GGGTCCAGCT CACCTCGATC
ACGGCCTATG AACAGGTAAA CCGGGCAACC CTGGAGGACA CCGACGCGAG CCCCAACCAG
GTCATCACGG CCTACTACGA GGACCGCCCG CGCCAGTTCA GCCAGGAACT GCGCCTGCAA
TCGGTGGGCG AGAACACCTT CAACTGGATC GTCGGCGGCT TCTACTTCCA CGACAACCTG
AAGACCGACA GCGCCTTCGA TCTTCTGCGA GGCCTGCGCG ATCCATCGGC ACCGCTCGAG
GGCTTCGATC CGGCGAATTC TCTGGGCCTG CTGCGCTATC CCTACACCCA GAAGACCGAC
AGCTACGCCG TGTTCGGGCA GGGCGACTAC AAGCTGACCG ACCGCCTCAC CGCCACGCTC
GGCCTGCGCT ACTCGCACGA TCGCATCGGC ATGAAGTTCG CCAGCCTGTT CGACGCCCTG
GGGACGGTGA ATCCGCGCAA GGCCTTTTCG GACGTTGTCG TGCCGCTGAT CGACTTCAAC
GAAAGCAAGG GCTTCAATGA CCTGAGCTGG CGCGCGGCGC TCAACTACAA GGTGGACAAC
GCGCTCATCT ACGCGTCGTT CTCGAAGGGC TACAACAGCG GGGGCTTTGC CGGCGGGGCC
TCGACCGACG CCGCGCAGTT GACGCCGTTT GGTTCGGAAC GGCTCTATGC CTACGAGGTC
GGCTTCAAGA CGGACCTGTT TGACCGCCAC CTGCGCTTCA ACGCTTCCGG GTTCTACTAC
GATTATCGGG ATCTCCAGGT CTTCATCTTC GACCTGAGCG GGCCCGTACC CGTCCAGCGC
AAGCTCAATG CCGGCAATGC GCGGATCTAC GGTCTGGAAG CCGAAATCAC CGCCGTACCC
GTGCGCAATC TTGAACTGTT CACGGCGTTC ACGCTGATGG ACAGCAAGTA CAAGACGTTC
ACGGCGCTTG GCGGGGCTAG CCTTGCCGGC AATCGCCTTG TAAATGCACC GGAGTTCGCG
GGCGCGGCTG GCATCAGGCT GACCGTCCCG ATGGCCAACG GCAGCGAGGT CCGGGCCAAG
GTGGACGGCA CCTACACCTC GTCGTTCTTC CTCTATCCCG ACAATCTGGA AGCCAACAAG
GTCAAGGGCT ACGGCCTGCT GAACGCCCGC GTTGGCTGGG CCGCGCCCGG AGGTCGTTAC
GAGATCGCCC TGTGGGGCAA GAACCTGACC AAGACCGAAT ACATCACTGG CATATTCCCG
ATCATCACCC AGGATCAGCT CAACTACAAC GAGCCGCGCA CCTACGGCAT CGAGCTTAGC
GCGCACTTCT GA
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| Protein sequence | MIRFSQKHKL MAVLAATTYL FALPVVVRAQ AADQSTGQSA GRADGGLGEI VVTAQRRQQN
VQDVPIAITA VTGEALRDSG VRDPRDLTLL VPSLSMQAGT AASTTSLFIR GVGIGDFNSN
TTGAVGVYVD DVFLGANAGK LFNVFDSEGI EVLKGPQGTL YGRNTTAGAI RFSSRKPTDT
LSGDVSALYG RFNEVRIEGG VGGPIAGDVL TARISGLYHR NDGTTFNRVT GHRVNNINLW
AGRGILDFKP DADTLVRLTV HGGANNGGAR QFQHRGQGVD FFGDPAFLPD GTPTDGFGYA
DTDGDPYAGD YDVEGKERIR VFGASLLGQF TFGGVQLTSI TAYEQVNRAT LEDTDASPNQ
VITAYYEDRP RQFSQELRLQ SVGENTFNWI VGGFYFHDNL KTDSAFDLLR GLRDPSAPLE
GFDPANSLGL LRYPYTQKTD SYAVFGQGDY KLTDRLTATL GLRYSHDRIG MKFASLFDAL
GTVNPRKAFS DVVVPLIDFN ESKGFNDLSW RAALNYKVDN ALIYASFSKG YNSGGFAGGA
STDAAQLTPF GSERLYAYEV GFKTDLFDRH LRFNASGFYY DYRDLQVFIF DLSGPVPVQR
KLNAGNARIY GLEAEITAVP VRNLELFTAF TLMDSKYKTF TALGGASLAG NRLVNAPEFA
GAAGIRLTVP MANGSEVRAK VDGTYTSSFF LYPDNLEANK VKGYGLLNAR VGWAAPGGRY
EIALWGKNLT KTEYITGIFP IITQDQLNYN EPRTYGIELS AHF
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