Gene Saro_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0149 
Symbol 
ID3918123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp149630 
End bp150133 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID640442874 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_495432 
Protein GI87198175 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTAT TTAATCTACT TGATTTAATC AAGCGGAAAA TCGACACTAG GTACATGCAG 
CTAACTCAGC ATACCGATCT TGGCCTGCGC CTGCTGATCG TCCTTGCGCG CAAGGGCGCG
GCGGTGAGCT TGCCGGCGTT TTCGGCAGAG CAGGGGCTGA GCTACCACCA CGTCGCGAAG
GTCGCGCAGG CGCTGGTCCA CGAAGGCTTC GCTACATCGC AGCGCGGGCG CAGTGGCGGC
ATCGCGCTGG CGCGTGAAGC AACGAACATT CGCGTGGGCG ACGTGGTCCG CGCGCTTGAG
CGGGGGATGC GGTTGGCGGA TTGCGGCGGA TGCGCCCTGC GCGCCGATTG CGGCCTCAGC
GGCGTGCTGG CCGAGGCACT GGAAGCATTC ATGGCGGTAC TCGACCGCTA CACCCTGGCC
GACGTCTCGC GCGAGGGGGT GCCGGCTTTC GCGCCATGGA CCTTTGCGCC CCCCTCACCC
GGGTGCACCA ACAGGAACCC TTAG
 
Protein sequence
MLVFNLLDLI KRKIDTRYMQ LTQHTDLGLR LLIVLARKGA AVSLPAFSAE QGLSYHHVAK 
VAQALVHEGF ATSQRGRSGG IALAREATNI RVGDVVRALE RGMRLADCGG CALRADCGLS
GVLAEALEAF MAVLDRYTLA DVSREGVPAF APWTFAPPSP GCTNRNP