Gene Saro_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0124 
Symbol 
ID3916010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp126726 
End bp127250 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content60% 
IMG OID640442849 
ProductCarD family transcriptional regulator 
Protein accessionYP_495407 
Protein GI87198150 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGTA AGGCACTCGC CTTCGATGTT GGGGACTACG TCGTTTACCC GAAGCACGGC 
GTCGGCCGGG TGGTCGAACT TCAGGATGAA GAAATTGCCG GCATGAAGCT GCAGCTCTAC
GTGCTGCGCT TCGAGAAGGA ACGCATGACG CTGCGCGTTC CTGTGAACAA GGTCGAAGCG
ATCGGCATGC GCAAGCTGTC GTCGGACAAG ACGCTGCGCG AAGCGCTCGA TACGCTCAAG
GGCAAGCCCA AGGTCAAGCG CACCATGTGG TCGCGCCGCG CCCAGGAATA CGAAGCGAAG
ATCAACTCGG GCGACCTCGT GTCGATCGCC GAAGTGACTC GCGATCTGTT CCGTGCCGAT
GACCAGCCTG AACAGTCGTA CTCGGAACGA CAGATCTTCG AAGCGGCTTC GTCGCGCCTG
GCCCGCGAAC TCGCGGCGAT GGAAAAGACC GACGAGCCCG CTGCTCTGAA GAAGATCCTC
GCGATCCTCA ACGAACACGC GCCCAAGTAC TACGAAACGG CCTGA
 
Protein sequence
MAGKALAFDV GDYVVYPKHG VGRVVELQDE EIAGMKLQLY VLRFEKERMT LRVPVNKVEA 
IGMRKLSSDK TLREALDTLK GKPKVKRTMW SRRAQEYEAK INSGDLVSIA EVTRDLFRAD
DQPEQSYSER QIFEAASSRL ARELAAMEKT DEPAALKKIL AILNEHAPKY YETA