Gene Saro_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0100 
Symbol 
ID3917548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp102849 
End bp103934 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content67% 
IMG OID640442825 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_495383 
Protein GI87198126 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGAGG CTCGCCTGGC GGGACTGGTG TCGTGCGAGG TCAACGGCGG CGCGGGATGG 
AACCCGACCG CCGCGACCCG CGCCGAAGCG GTGAGGCTGG GAGGACCGAT GCCGGTCTCC
TTCGCCGGTG GGAACACGTC CGTGCAAGGC CTGGTGGCGG TGATCCGTGG CGACGCCCTG
CCGCCGGCCC AAGCCATCGC CGATGCAGTG GCAGGCCGCA ACGAGCCGGT CGAAGGCGTG
GAAATCACGT CAGGACCGGG AATCGACGAG GCGATCGCCC GCGCGGTTTC GGCTGGACGC
GACGCGGCGG CGCGGCTTGA AGCCGCCGGG CGCGCAATCC TTCGCGGCAC AGCCAAGCCG
ACTGACGGGA TCGTCTCGCG GCACGTCAAT CGCCCGCTGT CGCAGGCGAT CTCGACCGTG
GCGCTGCGTA TCCCCGGCTT CCGGCCCGTC CACGCCACGA TCGGCACCGC CGTCATTGCC
ATGGCCATGT TCGCCTGCCT TCTGCTGGGT GGGGAAAGTG GCCTTGTCGC AGGCGCGCTG
CTGTTCCAGG CGGCATCGAT CTTCGATGGC GTCGACGGGG AGGTTGCGCG GGCCACATGG
CGCACTTCAC CGGAAGGCGC GCGCATGGAC AGCCTTATCG ACGCGGCGAC GAACCTCGCC
TTTCTGGCAG GTGTGGCATT CAACCTTCAG CTTCAGGGCC GCATCTTCGC TGCAAGTCTG
GGGTACACAG GGCTCGCACT TCTCGCTATC GGGCTGTTCC TGATCGGACG CGCGGCGGCC
CGCAGTAATG CCCCGTTCAG CTTCGATCTG GTCAAGGAAC ACTATCGGGC CAAGGGTGCG
GCTGCGGATC GGACTGGCAG CCCTGTGGCC GGAAACAGCC CTTCCGGCGG TGGTGAGATC
CGGGACACGA GGCCGTCGCA GATCATGCAA TGGCTGACAT TCATGACCAG CCGCGATTTT
TTCGCGCTGG TGTTCGCTCT GTTGATCGCG GGAGGGCTTG CGGCGCTAGT CCTGGCCCTT
TTTGCGATCG CGGCGGCGGG GTGGCTGGTT GCAGTCATCC TCGCCCTCGT GCCGAAGCAA
GCTTGA
 
Protein sequence
MREARLAGLV SCEVNGGAGW NPTAATRAEA VRLGGPMPVS FAGGNTSVQG LVAVIRGDAL 
PPAQAIADAV AGRNEPVEGV EITSGPGIDE AIARAVSAGR DAAARLEAAG RAILRGTAKP
TDGIVSRHVN RPLSQAISTV ALRIPGFRPV HATIGTAVIA MAMFACLLLG GESGLVAGAL
LFQAASIFDG VDGEVARATW RTSPEGARMD SLIDAATNLA FLAGVAFNLQ LQGRIFAASL
GYTGLALLAI GLFLIGRAAA RSNAPFSFDL VKEHYRAKGA AADRTGSPVA GNSPSGGGEI
RDTRPSQIMQ WLTFMTSRDF FALVFALLIA GGLAALVLAL FAIAAAGWLV AVILALVPKQ
A