Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0098 |
Symbol | |
ID | 3917546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 100138 |
End bp | 101661 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640442823 |
Product | O-antigen and teichoic acid-like export protein |
Protein accession | YP_495381 |
Protein GI | 87198124 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGACGCCAA GCGCCTCTGC CATGGCCCCG TCGAGCACTC CCCAGAAGGT CATCGCCCGT GGGGTGGGCT CAAACGCCTT CAGCTTCGTC ATCCGCTTCG CCGCGAGGGC CTCGTTCCTC TATGTCGGTG CTCGCCTTTA CGGCGCGGCC AACTACGGCG TGTTCACGAT GGCAAGCGCG ATGGTCGAAC TGGCCGTACC GGTGGCCAGC CTCGGCCTGA AGCGCATGAT CTTTCCCTGG CTGGAGGAAG AGGCGCATGG CGATTCGCCG CGCCCGGCGA CTCACGTTCT GCTCGATGCG CTGCTGCTCG CGGCCTGCGC AGGCGTTGCG GTTGCGCTGC TGCTGATCCT GGGTACGCGC CTGCTCCCCG CATCAGTCGT TTCAGACCAG CTGCGACTTG CCTTCGCACT GCTGGCGCCG GCGGTGCTGG GCCAGGTTAC CGGCGACATC GCGCTCGCCG CGACGCGATG GACGCACAAG ATGCGCTATG AAGTTATCGC GCGGGGGTTG GTCGAGCCCT ACGTGCTGAC CGGCGTGGCA CTGGTCGCCT GGCATGCCGG CCTGCACGAT ACGGGGATGC TGCTGGGTTA CTGGGCGGGA TCGATCGCGC TCGCCGGATT CTCGTTGTGG AGCGCGCGGC ATTGCCTGGG ATCGCTACAG ATGCGGCGCT GGCGGCCCAA TCTCAACGGC CTTGCCCACC GCGCGCGGTC GCTCGTGCCG GCTAGCGGTA GCGACTTCCT GACCAACCTG GCTCAGCGCA TCGACCTCTA TCTCGTGGGC TTCCTGCTGG GCGACGCGGC TGTCGGCGTC TATGGCGTGC TGCGCCAGCT CCGCACCCCG ATCCTGCAGG TCCGGCAGGC CTTCGACGGC ATCTTGACGC CGCTGACCGC GCGAACGCTA AAGACCGATG GCGAACTGGC GACGGGCGAG GCGACGGCCG CAGCGACGCG CGTCATCCTC ACCATCCAGC TCGGCGTGGT ACTTCTGATG GCAGCAGCGG GCGATGCGCT GCTCGACCTG TTCGGCGCGC ACTATGCGAC CGGCTATTCG GCCTTGCTGG CCATGGTGCT GGCCGAGACG ATCAACGGAG CGTTCGGTGT GTCGGAGCTG ATCCTCTACT ACCGCCGGCC CGCGCTCGCG CTGAAGGTCA ACCTGATCCT GATCGCGATC GCCGCGGCGA CGATCCCGCT CCTGACGCCG CATTACGGAA TCCTCGGCGC GTCCATGGCA ATGCTGCTGG CGGCGGTCGT CGCGGCCCTG CTGCGGCGGT ACTGGCTGGC GGGTCTTGGC GTCAGACGGC ATCCGCTTCA TGCGGCCGTG CCTGCAGTGG CAGCGGGGGT TTCGGTCCTG CTCGGCGCCT ATGCGGGCTG GGTTGTGCGG ATGAGCCTGC TGCAGGGCGC GCCGGCCGGA CTGGTCAAGG CGACACCGCC GCTGCTGGCG CTGGCGTTCT ACCTGCTGTT CGTGTGGGGC TGGCGCAAGG CGAGGCCCGG CATCCTGTCG CTCGACCGCT ACCGCGTCAG CTGA
|
Protein sequence | MTPSASAMAP SSTPQKVIAR GVGSNAFSFV IRFAARASFL YVGARLYGAA NYGVFTMASA MVELAVPVAS LGLKRMIFPW LEEEAHGDSP RPATHVLLDA LLLAACAGVA VALLLILGTR LLPASVVSDQ LRLAFALLAP AVLGQVTGDI ALAATRWTHK MRYEVIARGL VEPYVLTGVA LVAWHAGLHD TGMLLGYWAG SIALAGFSLW SARHCLGSLQ MRRWRPNLNG LAHRARSLVP ASGSDFLTNL AQRIDLYLVG FLLGDAAVGV YGVLRQLRTP ILQVRQAFDG ILTPLTARTL KTDGELATGE ATAAATRVIL TIQLGVVLLM AAAGDALLDL FGAHYATGYS ALLAMVLAET INGAFGVSEL ILYYRRPALA LKVNLILIAI AAATIPLLTP HYGILGASMA MLLAAVVAAL LRRYWLAGLG VRRHPLHAAV PAVAAGVSVL LGAYAGWVVR MSLLQGAPAG LVKATPPLLA LAFYLLFVWG WRKARPGILS LDRYRVS
|
| |