Gene Saro_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0092 
Symbol 
ID3917540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp95267 
End bp96148 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID640442817 
ProductHpcH/HpaI aldolase 
Protein accessionYP_495375 
Protein GI87198118 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCCA GATCCTGGCT CTTCGTACCC GGAGACAGCG AGAAGAAGCT GGGCAAGGCC 
ATGGCCACGG GCGCGCATGC GGTAATCGTC GACCTCGAGG ACGCGGTGGC GCCGGCGGCA
AAGCCGCAGG CCCGCGTCCT CGCCCGGGAC TGGCTTGGAA TCCACCGCCA GCACGTGACC
GAAAACCGCC CCGTGGCGCG GTGGGTGCGC ATCAACGCAA TCGACACCGG CATGTGGCGC
GAGGACCTGC AGGTCGTCAT GGCTGGCGCG CCAGACGGCG TGATGCTGCC CAAGTGCGAG
GGACCAGAAC AGGTCCGCCA GCTTGCCGCT GAAATCTATG AGCTGGAACA GCGCAACCGC
GTGCCCAACG GTTCGACGCG GATCCTGCCT CTGGTCAGCG AGACAGCCAA GTCGGCGCTG
ACCATCACCA GCTACGTCGA CGAACCCATG CCGCGCCTAG CCGGGCTGAC ATGGGGCGCC
GAAGATCTTT CGGCCGTGCT GGGCGCCACG CGCAAGCGGG ATGCCGCCGG CGCGTGGACA
GACGCTTTCC GGTTCATCCG CGCGCAATGC CTGCTGACCT CGCACGCGAA GGGCGTCTGG
GCGATCGACA CCCTGCACGA CGATTTTCGC GACGAGGCGG GCACGAAGCG GGCGGCCGAG
GCCGCGCGAG CCGACGGATT CACCGGCATG CTGGCCATCC ACCCATCGCA GGTGCCGATC
ATCAACACGG CCTTTGCTCC GACGGAGGCT GAACTTGCCG AAGCGGAAGC CATTGTCGCA
CTGTTCGCCG CCAGCCCCTA TGCCGGGACG CTGCAATACA ACGGCCGCAT GGTGGACCAG
CCGCACCTCA GGATGGCGAA GCAGCTACTC GGCAGAACCT GA
 
Protein sequence
MPPRSWLFVP GDSEKKLGKA MATGAHAVIV DLEDAVAPAA KPQARVLARD WLGIHRQHVT 
ENRPVARWVR INAIDTGMWR EDLQVVMAGA PDGVMLPKCE GPEQVRQLAA EIYELEQRNR
VPNGSTRILP LVSETAKSAL TITSYVDEPM PRLAGLTWGA EDLSAVLGAT RKRDAAGAWT
DAFRFIRAQC LLTSHAKGVW AIDTLHDDFR DEAGTKRAAE AARADGFTGM LAIHPSQVPI
INTAFAPTEA ELAEAEAIVA LFAASPYAGT LQYNGRMVDQ PHLRMAKQLL GRT