Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0061 |
Symbol | |
ID | 3917658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 62365 |
End bp | 63528 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640442786 |
Product | peptidase M23B |
Protein accession | YP_495344 |
Protein GI | 87198087 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTTG CCCCGCTGCG GCTGAGGGAA GCCGTTGCCC GCGTGCGCGG CTGGTTCCCG GATCGCGAAT TCTTCATGCG CGCCGAGGGC CAGGTGCGCT TCATCCGCAT TTCCTCGCGC CTGCAGATGA CCATCGCCGG GGCCATTGCC GCCGCGCTGC TGCTGTGGGT GCTGGTGATG GCGGCGACGC TCGTGTCGCA GTTCACCGCC GCTCGCGATC ATGCCGCCCT GCTCGAACGC GAAGCAGCCG TCGCATCCGC CGAGAACCGC GTGGCGAAGT ATCGCGGCGG CCTCGAAGGC GTGGCCGACG ATCTCAATCG CCGCCAGGAC TTCATCGAGA AGGCCATCGA GGGAACGATC GGCGAACTGC CCAAGGACCT GCCCCGTGGC ACCGTTTCGG ACAGCACCGG CGAGGCCGCG AAGACAGTGC GGAAAGTATC CGCCGTCCTC CCAGAAGCGC GCCGCCTGGC CGAAGTCGAG GCGCGCCAGC TTGCCTTCAT CGAGCGCCTG ACCCGCTTCG CCGATGCCCG CTCCGTGGCT GCCGAAACCG CCATCCGCCG CGTCGGACTC AACCCCGCGA TGATCCGCTC GGCCTCGCGG GAGGGGACCG GTGGTCCGCT GATCCACCTG TTCACCGGCC GCGACGAAAC GCTCGATCCG CGTTTCGCCC GCCTCGGCGC AAGCCTTGAG CGCATGGCAT CGCTGGAAAA GGGCCTCGCC CGCATCCCGA ACACGCTTCC GGCCAGCCTG GAATACATAT CGAGCGGTTT CGGCTATCGC TCGGACCCGT TCACCGGCGG CCCTGCGTTC CACGCCGGGC TCGACTTCCG TGGCCCGGTC GGCGCGCCGA TCTATGCAGC GGCGGCAGGT ACGGTGAGCT TCGTCGGCGT CCGCCAGGGC TATGGCAACG TGGTGGAAGT AAGCCACGGC AACGGCCTGC TCACCCGCTA CGCCCACATG TCGCGTACAC AGGCGCGGGT CGGGCAGAAG GTGGACGCAG GCGCCGAAAT CGGCAAGATC GGCAACACGG GGCGCTCTAC CGGCCCTCAT CTTCACTTCG AGGTGCGGAT CAACGACCGT CCGGTCAATC CGCGCCCGTT CCTTGAGGCA AACAGGCATG TTCAGGAAAT CCGCGCCGGA GCAGGCGCAC AGCACCGGGA GTAA
|
Protein sequence | MKLAPLRLRE AVARVRGWFP DREFFMRAEG QVRFIRISSR LQMTIAGAIA AALLLWVLVM AATLVSQFTA ARDHAALLER EAAVASAENR VAKYRGGLEG VADDLNRRQD FIEKAIEGTI GELPKDLPRG TVSDSTGEAA KTVRKVSAVL PEARRLAEVE ARQLAFIERL TRFADARSVA AETAIRRVGL NPAMIRSASR EGTGGPLIHL FTGRDETLDP RFARLGASLE RMASLEKGLA RIPNTLPASL EYISSGFGYR SDPFTGGPAF HAGLDFRGPV GAPIYAAAAG TVSFVGVRQG YGNVVEVSHG NGLLTRYAHM SRTQARVGQK VDAGAEIGKI GNTGRSTGPH LHFEVRINDR PVNPRPFLEA NRHVQEIRAG AGAQHRE
|
| |