Gene Saro_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0048 
Symbol 
ID3917645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp51006 
End bp51617 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID640442773 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_495331 
Protein GI87198074 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.892754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTG AACGGACTGC CGAAGCGATC CCGCATGCGG ATCCGCTCTC GATCTTCGAG 
TCGTGGTTTG CCGAGGCCCG GGCGAGCGAG CCCAACGATC CGAACGCGAT GGCGCTGGCT
ACGGCGACGG CGGAAGGCGT GCCCTCGGTG CGCATGGTCC TGCTCAAGGG CCACGGGCCC
GACGGTTTCG TGTTCTACAC CAACCTCCAA AGCCGCAAGG GCGGTGAACT CGCGGCAAAC
CACCACGTTG CGCTGCTGTT CCACTGGAAA TCGCTGCGCC GCCAGATCCG CATCGAAGGG
ACCATCGCCA AAGTCACCCC GGCCGAGGCT GACGCCTATT TCGCCAGCCG CCATCCCGAA
TCGCGTCTCG GTTCGGCGGC TTCGGACCAG TCGCGCCCCT TGCCGGACCG GCAGACCTAC
CTCGACCGCG TCGATGCGCT GCGGGCGCAG TATCCCGATG GAAACGTCCC ACGCCCGGCG
CACTGGTCCG GCTACCGCGT GACGCCGTCC GCCATCGAGT TCTGGCAGGA CCGCGACTTC
CGACTGCACG AACGCCGCCG CTTCCTTGCC GATGGGCAGG GCGGCTGGAC CAGCACCCTC
CTTTACCCCT AA
 
Protein sequence
MNSERTAEAI PHADPLSIFE SWFAEARASE PNDPNAMALA TATAEGVPSV RMVLLKGHGP 
DGFVFYTNLQ SRKGGELAAN HHVALLFHWK SLRRQIRIEG TIAKVTPAEA DAYFASRHPE
SRLGSAASDQ SRPLPDRQTY LDRVDALRAQ YPDGNVPRPA HWSGYRVTPS AIEFWQDRDF
RLHERRRFLA DGQGGWTSTL LYP