Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0048 |
Symbol | |
ID | 3917645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 51006 |
End bp | 51617 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640442773 |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_495331 |
Protein GI | 87198074 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.892754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCTG AACGGACTGC CGAAGCGATC CCGCATGCGG ATCCGCTCTC GATCTTCGAG TCGTGGTTTG CCGAGGCCCG GGCGAGCGAG CCCAACGATC CGAACGCGAT GGCGCTGGCT ACGGCGACGG CGGAAGGCGT GCCCTCGGTG CGCATGGTCC TGCTCAAGGG CCACGGGCCC GACGGTTTCG TGTTCTACAC CAACCTCCAA AGCCGCAAGG GCGGTGAACT CGCGGCAAAC CACCACGTTG CGCTGCTGTT CCACTGGAAA TCGCTGCGCC GCCAGATCCG CATCGAAGGG ACCATCGCCA AAGTCACCCC GGCCGAGGCT GACGCCTATT TCGCCAGCCG CCATCCCGAA TCGCGTCTCG GTTCGGCGGC TTCGGACCAG TCGCGCCCCT TGCCGGACCG GCAGACCTAC CTCGACCGCG TCGATGCGCT GCGGGCGCAG TATCCCGATG GAAACGTCCC ACGCCCGGCG CACTGGTCCG GCTACCGCGT GACGCCGTCC GCCATCGAGT TCTGGCAGGA CCGCGACTTC CGACTGCACG AACGCCGCCG CTTCCTTGCC GATGGGCAGG GCGGCTGGAC CAGCACCCTC CTTTACCCCT AA
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Protein sequence | MNSERTAEAI PHADPLSIFE SWFAEARASE PNDPNAMALA TATAEGVPSV RMVLLKGHGP DGFVFYTNLQ SRKGGELAAN HHVALLFHWK SLRRQIRIEG TIAKVTPAEA DAYFASRHPE SRLGSAASDQ SRPLPDRQTY LDRVDALRAQ YPDGNVPRPA HWSGYRVTPS AIEFWQDRDF RLHERRRFLA DGQGGWTSTL LYP
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