Gene Saro_0029 details

Gene Information

• Locus tag: Saro_0029
• Symbol: rplJ
• ID: 3916032
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 30749
• End bp: 31261
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640442754
• Product: 50S ribosomal protein L10
• Protein accession: YP_495312
• Protein GI: 87198055
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0244] Ribosomal protein L10

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.167833
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCGTT CGCAGAAAGC CGAATCGGTC GCCTTCCTGA ACGGCGTCTT CGCAGAGGCA 
GGCGCGGTGG TCATCACCCG CAACCTCGGC ATGACGGTGG CCCAGTCCAC CGCCCTGCGC 
ACGAAGATCC GCGAAGCGGG CGCGACCTAC AAGGTTGCGA AGAACAGTCT TGCCAAGCTT 
GCCGTCGCGG GCACCGATTA CGAAGGTCTG GTGGACTTGT TCACCGGCCC GACCGCAATC 
GCGGCGTCCG CCGATCCGGT TGCTGCCGCC AAGGCAGTGG TCGAGTTCGC CAAGACCACC 
GACAAGATCG AAATCGTCGG TGGTGCAATG GGTTCGCAGG TTCTCAACGA AGCCGGGGTC 
AGGGCGCTCG CCTCCATGCC CAGCCTCGAC GAACTGCGCG GCACGCTCAT CGGCCTCATC 
CAGGCTCCGG CCACGAAGAT CGCCCAGCTC ACGACTGCCC CGGCAGCGAA GCTGGCCCGC 
GTCTTCGGCG CCTACGCCAA GGAAGCCGCA TAA 

 

Protein sequence

MDRSQKAESV AFLNGVFAEA GAVVITRNLG MTVAQSTALR TKIREAGATY KVAKNSLAKL 
AVAGTDYEGL VDLFTGPTAI AASADPVAAA KAVVEFAKTT DKIEIVGGAM GSQVLNEAGV 
RALASMPSLD ELRGTLIGLI QAPATKIAQL TTAPAAKLAR VFGAYAKEAA