Gene Saro_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0017 
Symbol 
ID3916059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp12595 
End bp13257 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID640442742 
ProductTonB-like 
Protein accessionYP_495300 
Protein GI87198043 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATACG CTGACCAACA GATGAGCGGT AACAAGATCA CCGCGCTCAT CATCGTTGCG 
ATTCTTCATG TCGTCGTCGG CTACGCGCTC GTCACCGGGC TGGCGTACGA GGCGATCAAG 
AAGGTCAAAG AGGTGACCTC GGCGGTCAAC ATCGAGGAAG AGAAGCCGCC GGAGGAGCCG 
CCGCCGCCGC CGCCTCCGAA GGAGGATACG CCGCCGCCGC CGATCGTCGC GCCTCCGCCG 
CCGATCAGCT TCAACGCGCC GGCGCCGCAG GTCCAGACGG TAAACGAAGC TCCCGCGATT 
CCGGCTCCGC CGGCACCGGT GGCGCTTCCG GCCCCGCCTG CTGCGCCTCC GCCGCCGCGA 
TTTACCCCCA AGGCTGCAAC GCCGAAGGGT AACCCCGGCA ACTGGGCGAC GTCGAACGAC 
TACCCATCGC GTGCGCTTCG CGAAGAGCGT GAAGGCACCA CGGGTTTCCG TGTCACGGTC 
GGACCCGACG GCAAGGTTAC GGACTGCCAG ATCACCAGGT CTTCAGGCAG CCCCGATCTT 
GACGAGGCGA CTTGCTCGAA CGTCCGCCGC CGCGCGCGCT TTGCGCCCGC GATGGATGGC 
GAGGGCAACC CGACCACGGG CTCGTATTCG AACTCGATCC GCTGGGTCAT TCCTAAGGAC 
TGA
 
Protein sequence
MAYADQQMSG NKITALIIVA ILHVVVGYAL VTGLAYEAIK KVKEVTSAVN IEEEKPPEEP 
PPPPPPKEDT PPPPIVAPPP PISFNAPAPQ VQTVNEAPAI PAPPAPVALP APPAAPPPPR 
FTPKAATPKG NPGNWATSND YPSRALREER EGTTGFRVTV GPDGKVTDCQ ITRSSGSPDL 
DEATCSNVRR RARFAPAMDG EGNPTTGSYS NSIRWVIPKD