Gene Saro_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0014 
Symbol 
ID3916056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp10639 
End bp11079 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content58% 
IMG OID640442739 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_495297 
Protein GI87198040 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATGA GCGGCGGCAA GGATGATGGC TCGCCGATGA TGGAAATGAA CACGACGCCG 
TTGATCGACG TCATGCTCGT TCTCCTCATC ATGTTCATCA TCACCATCCC GGTGGCCACC
CACGCGGTGA ACATCGACCT TCCGCAGCCT TCGCAGGTGC CAAACAACGT CACGATCGAT
CCGATCAAGA ACAAGCTTGT GCTGACCGCG ACCAACCAGA TTCTCTGGAA CGGCGCGCCG
GTCAACTCCG GCCAGCTGGT CTCGATCATC CAGGCGACGA AGGGCATCGA TCCCGAGCCG
GAACTGCAGT TCCAGCCCGA GGAGTATGCG AGCTACGAAA TCGCGAACCA GTTGATGAAG
ATCATCACGG ACGCGAAGGT CACCAAGTTC GGCTTCGTCG GCAACGAGAA CTTCGCCACC
TTCCAGAAGG CTGGCCAGTA A
 
Protein sequence
MAMSGGKDDG SPMMEMNTTP LIDVMLVLLI MFIITIPVAT HAVNIDLPQP SQVPNNVTID 
PIKNKLVLTA TNQILWNGAP VNSGQLVSII QATKGIDPEP ELQFQPEEYA SYEIANQLMK
IITDAKVTKF GFVGNENFAT FQKAGQ