| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4705 |
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| Symbol | |
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| ID | 3912523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5324776 |
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| End bp | 5326362 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637886610 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_488299 |
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| Protein GI | 86751803 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.643471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAC CCAGAGAAGC GCCGGGGATT GTCAGTCCGT TCGCCGGCAT GGACGTGCCA
TGGCTGCTGC GGCTGCACGC GCAGGCGCGG CCCGAACATC CCTTCGTGAT CTGGGCGCCG
TTCGACGCCC CGGCGCGGGT CTGGCGCTAC GGCGAATTCC ACGACCGCGT CGGCGCGCTC
GCCGCCGGCC TGGTCGCGCG CGGCGTCCGG CCCGGCGACG CGGTGCTGAT CCATCTCGAC
AATTGCGCCG AATTCCTGCT CGCCTGGTTC GCCTGCGTCG AGCTCGGCGC GCTCGCGGTG
ACCACCAACA CCCGCTCGGC GGCGGCCGAG ATCGATTACT TCGCCGACCA CTGCAACGCC
GTCGCCGCCA TCACCCAGCC GGCCTATGCC GAACTGGTCG CGGCGAACTG CAAGAAGCTG
CGCTGGATCG CGGTGATCTC GCACGATCCC GGCTCGCCGC TGCCGGCGCA GCCGGTGGCG
AAGGCGGAGT CGTTCGACAG CCTGTTCGGC GACAGCGCCA ACCGGCCGCG GCGGCCGACC
GACCCGTTCG CGCCGTGCAG CGTGCAGTAC ACTTCGGGCA CCACGTCGCG GCCGAAGGCG
GTGCTGTGGA CCCACGCCAA CGCGCTGTGG GGCGCCAAGA TCAACGCCGC CCACCAGACG
CTGCGCGCCG ACGACGTCCA CCTCGCTTAC CTGCCGCTGT TCCACACCAA CGCGCTGGCC
TATTCGATGC TGGCGAGCCT GTGGGTCGGC GGCACCTGCG TGGTGCAGCC GCGGTTCTCG
TCGAGCCGGT TCTGGAAGGT GGCGCTGGAG CACCGCTGCA CCTGGAATTC CAACATCGCG
TTCTGCCTGA AGGCGCTGAT GGATCAGGAG ACGCCGAAGG ATCACTCGTT CCGTCTGTGG
GGCACCGCGG TCGCCGAACC GCCGGTCTTC GCCGGGTTCG GCATCAAGAT CATCGGCTGG
TGGGGCATGA CCGAGACCAT CACCCACGGC ATCATCGCCG AGGCCGACCA GCCCAACACG
CCGATGTCGA TCGGCCGCGC CGCGCCCGAA TATGCGATCC GCATCGTCGG CGAGGACGGC
GCGCCGACGG CCGTCGGCGA CACCGGCAAT CTGCTGATCA AGGGCGTGCC GGGCCTGTCG
CTGTTCGCGG AGTATCTGCA CAACGAGCAG GCCACCCGCG ACAGCTTCGA CGAGCACGGC
TACTTCATCA CCGGCGACCG CGTCACGCTG CTGGAGCACG GCGCGATCCG GTTCGGCGAC
CGCGCCAAGG ACATGCTCAA GGTCGGCGGC GAGAACGTAG CGGCGTCCGA GATCGAGCAG
GTGGTGATCA CCGTGCCGGG CGTGCGCGAG GCCGCGGTGG TGGCGAAGAA GCACCCGATG
CTCGACGAGG TGCCGGTGGT GTTCGTGATC CCGGCGGCCG GCGTCGACAA GGCGGCGCCC
GACCTCGCCG ATCAGATCCT GGCGGCGTGC AGCCGGTCGC TCGCCGATTT CAAGCGCCCG
CGCGAAGTGC GCCTGGTCGA CGACATGCCG CGCTCGACGC TGGAGAAGGT GGCGAAGGCG
GAATTGCGCA AGATGCTGGC GGAGTAG
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| Protein sequence | MPQPREAPGI VSPFAGMDVP WLLRLHAQAR PEHPFVIWAP FDAPARVWRY GEFHDRVGAL
AAGLVARGVR PGDAVLIHLD NCAEFLLAWF ACVELGALAV TTNTRSAAAE IDYFADHCNA
VAAITQPAYA ELVAANCKKL RWIAVISHDP GSPLPAQPVA KAESFDSLFG DSANRPRRPT
DPFAPCSVQY TSGTTSRPKA VLWTHANALW GAKINAAHQT LRADDVHLAY LPLFHTNALA
YSMLASLWVG GTCVVQPRFS SSRFWKVALE HRCTWNSNIA FCLKALMDQE TPKDHSFRLW
GTAVAEPPVF AGFGIKIIGW WGMTETITHG IIAEADQPNT PMSIGRAAPE YAIRIVGEDG
APTAVGDTGN LLIKGVPGLS LFAEYLHNEQ ATRDSFDEHG YFITGDRVTL LEHGAIRFGD
RAKDMLKVGG ENVAASEIEQ VVITVPGVRE AAVVAKKHPM LDEVPVVFVI PAAGVDKAAP
DLADQILAAC SRSLADFKRP REVRLVDDMP RSTLEKVAKA ELRKMLAE
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