Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4670 |
Symbol | |
ID | 3912488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5282780 |
End bp | 5284186 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637886575 |
Product | cytochrome bd ubiquinol oxidase, subunit I |
Protein accession | YP_488264 |
Protein GI | 86751768 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.402337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGAAT CCCTGGACCC CGTCGTTCTG GCGCGCGCGC AGTTCGCCTT TACGGTTTCG TTTCACATCA TCTTCCCCGC CTTCTCGATC GGCCTGGCGA GCTTTCTCGC CGTTCTCGAA GCGCTGTGGC TGTGGACCGG GCGCGAGGTC TTCATCAACC TGTTCAATTA CTGGCTGAAG ATCTTCGCCA TCGCGTTCGG CATGGGCGTC GTGTCCGGCA TCGTGATGTC GTACCAGTTC GGTACCAACT GGTCGGTGTT TTCCGACAAG ACCGGGCCCG TGCTCGGCCC GCTGATGGCC TACGAGGTGC TGACGGCGTT CTTCCTCGAG GCCGGATTCC TCGGCGTGAT GCTGTTCGGC CTCAAGCGGG TCGGCCCCAA GCTGCATTTC ATGGCGACGC TGATGGTGGC GATCGGCACG CTGATGTCGG CGTTCTGGAT CCTGTCGGCT AATTCCTGGA TGCACACGCC GGCCGGCTAC GCGGTCAACG CCGACGGCCA GTTCGTCGCC GCCGACTGGT TCAAGCTGAT CTTCAACCCG TCGTTTCCGT ATCGTCTCGT CCATATGGTA CTGGCGGCAT ATCTGACCAC ATCGCTCGTG GTCGGGGCGG TCGGCGCCTA CCATCTGCTG AAGAATTCAC GGCAGCCGGG CGCGCGGATG ATGTTCTCGA TGGCGATGTG GATGCTGATG ATCGTCGCCC CGATCCAGAT CTTCGCCGGC GATCTCCATG GTCTCAATAC GCTGGAGCAC CAGCCCGCCA AGGTGATGGC GATGGAGGGG CACTACCAGA GCCACCCCGA CGGCGCTCCC TTCATCCTGT TCGGCCTGCC GGACCAGGAC GCCGCGGTGG TGCGCTATGC GCTGGAAATT CCCAAACTGT CGTCGCTGAT CCTGAAGCAT TCGCTCGACG CGCCGCTCGC CGGCCTCGAC ACCGTGCCGC GTGAAGACTG GCCGCCGGTG CCGATCACTT TTTGGTCGTT CCGGATCATG GTCGGGCTCG GGCTGCTGAT GGCCGCGCTC GGATTTCTCG GTCTGTGGGT GCGCTGGCGC GGCCGGCTGT ACGACTCGCG GCCGACGCAC CGGTTCGCGC TGATGATGGG GCCAGCCGGC TTCGTCGCGG TGCTGGCCGG CTGGGTCACG ACCGAAACCG GACGGCAGCC TTTCACCGTG TTCGGGCTGC TGCGCACGGT GGATTCGGTC TCGCCGCTCG CCGCGCCCGC GGTGGCGTCG TCGCTGATCG CCTTCGTGAT CGTGTATTTC GCCGTGTTCA TCGCAGGCAC CGTTTACATC CTGCGGCTGA TGGCGCACCC GCCGCATCAC GGCGAGGAGG GGCCGCCCGG CGAAACCCCC GCACGCGCCG CCGGCATCAC GCCGGCGCCC GCGATCGCCA CCCGCAGGTT GGGCTGA
|
Protein sequence | MFESLDPVVL ARAQFAFTVS FHIIFPAFSI GLASFLAVLE ALWLWTGREV FINLFNYWLK IFAIAFGMGV VSGIVMSYQF GTNWSVFSDK TGPVLGPLMA YEVLTAFFLE AGFLGVMLFG LKRVGPKLHF MATLMVAIGT LMSAFWILSA NSWMHTPAGY AVNADGQFVA ADWFKLIFNP SFPYRLVHMV LAAYLTTSLV VGAVGAYHLL KNSRQPGARM MFSMAMWMLM IVAPIQIFAG DLHGLNTLEH QPAKVMAMEG HYQSHPDGAP FILFGLPDQD AAVVRYALEI PKLSSLILKH SLDAPLAGLD TVPREDWPPV PITFWSFRIM VGLGLLMAAL GFLGLWVRWR GRLYDSRPTH RFALMMGPAG FVAVLAGWVT TETGRQPFTV FGLLRTVDSV SPLAAPAVAS SLIAFVIVYF AVFIAGTVYI LRLMAHPPHH GEEGPPGETP ARAAGITPAP AIATRRLG
|
| |