| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4668 |
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| Symbol | |
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| ID | 3912486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5281547 |
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| End bp | 5282158 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637886573 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_488262 |
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| Protein GI | 86751766 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.488765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGAACG TCATTGCCAT CAACGACGCA GGCCGCCAGG GCATTGCTGC CGCGCAGGCC
ACCACAGACG ATATGCTGCT GGCCAATATT GCCGCCGGCG ACCGGACTTC GATGCACACG
CTTTATTCCC GTCACAACGT GCGGGTTTAC CGCTTCATCC TGCGCATGGT GCGTGACGGC
GCGACGGCGG AAGATCTCGT CAGCCAGGTT TTTCTCGATG TCTGGCGCAC CGCCCGGCAG
TTCGAAGGCC GTGCCCAGGT CTCGACCTGG CTGCTGTCGA TCGCCCGCTT CAAGGCGCTC
ACCGCGCTTC GCCAGCGCCA GCATGAAGAC ATCGATCAGG ACGACGTGCT GGAGATTCCC
GACGGCGCCG ATACGCCCGA AGCCGCGCTC GACCGCAGCC GCACCAGCGA CATTCTGCGC
AGCTGCATCG CCAAGCTGTC GCCGGCGCAT CGCGAGATCA TCCACCTCGT CTATTATCAC
GAGAAGTCGG TCGAAGAGGT CGGCCGCCTC GTCGGCATTC CGCAGAGCAC GGTGAAGACC
CGGATGTTCT ATGCCCGCAA ACAGCTTGCC GAACTGCTGA AGCGCCACGG CGTCGAGACC
ATGGCCGCCT GA
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| Protein sequence | MQNVIAINDA GRQGIAAAQA TTDDMLLANI AAGDRTSMHT LYSRHNVRVY RFILRMVRDG
ATAEDLVSQV FLDVWRTARQ FEGRAQVSTW LLSIARFKAL TALRQRQHED IDQDDVLEIP
DGADTPEAAL DRSRTSDILR SCIAKLSPAH REIIHLVYYH EKSVEEVGRL VGIPQSTVKT
RMFYARKQLA ELLKRHGVET MAA
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