Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4648 |
Symbol | |
ID | 3912465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5255477 |
End bp | 5258179 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637886552 |
Product | osmosensitive K+ channel signal transduction histidine kinase |
Protein accession | YP_488242 |
Protein GI | 86751746 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCT CGACCGCCAC CGCACGCGCT TCACCCGACG CCCTGCTGGC CCTCGCCGGC AAGGAAGGGC GCGGCCGGCT CAAGATCTTT GTCGGCGCCG CGCCCGGCGT CGGCAAGACC TATGCGATGC TGTCTGCTGC GCGCAGCGAG CGGGATGGCG GCCGTGACGT GGTGGCGGGA TTGATCGAGA CCCATGGCAG GCTCGAGACC GAACACTTGC TGCAGGGCAT CGAAGTGCTG TCGCGGCACC CGATCGTTTA TCGCAACCGG GTGATGCGCG AATTCGACCT CGACGGCGCG CTGGCGCGCA AGCCTTCGTT GCTGCTGGTC GACGAATACG CCCACACCAA CGTGCCGGGC AGCCGCCATC CGAAGCGCTG GCAGGACATC GACGAACTGC TCGCCGCCGG CATCGACGTC TGGACCACGC TGAACATCCA GCATCTCGAA AGCCTCAACG ACGTCGTGCT GAAGATCAGC AAGATCCGCG TGCGCGAGAC GGTGCCCGAC AAGGCGTTCG ACCGTGCCGA CGAGATCGTG CTGGTCGACC TGCCGCCGGA CGAACTGCTG AAACGCCTCG CCCAGGGCAA GGTCTACGTC CAGGACACCG CGGCGCGCGC GGTCGAGAGC TTCTTCAAGC CGCAGAATCT CACCGCGCTG CGCGAACTGG CGATGCGCCG CGCCGCCGAG CGGGTCGACG CCGCTTTGGT CGAGCGGATG CAGGCGCACG CGATCGAAGG GCCGTGGGCC GCCGGCGAGC GCATCCTCGC CTGCGTCGGT CCGGACACCG GCTCGCCCGG CGTGGTGCGC ACCGCCAAGC GGCTCGCCGA CCTGATGGAC GCGCCGTGGA TCGCGGTGAC GGTCGAACGC TCCGGCGTCA ATCCCGACTC CGCGGCGCGC CGGCAGATCG ACGAGGCGCT GAAGCTCGCC GAGAGTCTCG GCGCCGAGAC CCATACGCTG ACCGGCAACG ACATTCCCGA CGAGCTGCTG CGCTTCGCCC GTTTCGAAAA CGTCACCCAG ATGGTGATCG GCCGCGCCCG CGGCGGCGCG CTGCGGCAAT GGCTCGCGGG CTCGCTGCCG CAGCAATTGA TGCAGCGCTC GACCGACATC GCCATCCATC TGGTGCCGGT GCAGGGGGAA CCCGCCGAAC GCGACAGCCG CTCGCTCGCG GCACGGCTGA ATGCGTCCAA GCCGGCGCAT TTTGTCTATG CGACCGTCGC GGTCGCCGGC GCGGTGGCGG TCGGCAAGGC GTTCGCACAG GCGATCCCGA CGGCGAGCCT GTCGGTGGTG TTCCTGATGG CGGTGCTGTT CAGCGCGGTG AAGTCCGGTG TCGGCCCGGC GATCTTCGCC TCGGTGCTGT CGTTCTTCAC TTACAATTTC TTCTTCATCG CCCCGCTCTA CACCTTCACC GTCGCGGAGC CCTACGAACT GCTGGCGCTG CTGATGTATC TGGTGGTCGC GATCGTCGCC GCGACGCTTG CCGGCCGGCT GCGTGATCAA GCGCGGATCT CCGCAGGCCG GGTTCGGGCG ATGCGGAGAC TCTACGAGTT CACCCGCCGG TTGTCGGGGC TCGCCACCAG CGATGATATC GCCGAAGGCG CGGCGAGCGA AATCCACGCC AGCCTGGGCC GCCCGGTGAT GGTGATGCTG CCGCGCGAGG ACGATCTGGT GCTGGCCGCA GCCTGGCCGC CGGAGGACGC ACTCGACGAG GCGGCGATGA TGGCGGCACG TTGGGCCTTC ACCCACAATG AACCCGCCGG CTTCGACACC GGCACGCTGC CGATCGTGCC GTGGCGTTTC CTGCCGGTGC GCACCGGCGC CACCACCTAC GGCGTGATCG GCGTGATGCA GAAGAAGGAC AGCGCTGCGC TCGACTCCGA GGCCCAGGCA CTGCTCGATA CACTCACCGA ACAGACCGCG GCCGCGCTGG AGCGCGCCGC ATTGACGCGC GACATGGTGA GGGCGCGGAC GGCGACCGAG ACCGAGCGCG TCCGCAACAC CTTGCTGGCT TCGATTTCGC ACGACTTCCG CACACCGCTG TCCTCGATCC TCGGCTCGGC CACCAGTCTG TCCACCTTTG GCGACAAGCT CGACGACGCC GCGACCCGCG ACCTGCTCGC CAATATCCGC GAGGAGGCCG AAGGCCTCGA CGAGATGGTG CGCAACCTGT TGTCGATCAC CCGGATCGAA TCCGGCGCGC TCGAACTGCG CCGCGACTGG GTCGATCTGC GCGAGATCGC CGCACGCGTG ATCGAAGCGG CACGGCGGCG CGGCGCGGCG CAACACATAG ACCTCGACTG CCCGGCCGAT AGTCCGCTGG TGCGGGCCGA CGCGGCGCTG GTCGAACAGG CGCTCGGCAA CATCGTCGCC AATGCCGTTG CGCACACGCC GCCAACGTCG CACATCCTGA TCGACGCCGA GAACGACGCG TCATCGGTGA AGCTGCGCGT CACCGACGAC GGCCCGGGCG TTGCCGTGGC CGATCTGCCG CGCATCTTCG ATCGCTTCGT GCGCAGCGCC AGCGGCACCG CGCCGTCCTC GAGTCGCGGC CAGGGCGTCG GATTGGGACT GGCCATCGCC AAGGGAATCA TGGAAGCGCA TGGCGGCGCG GTGTCCGCGC TCAGCCCCGT CGCGAACGGG CACGGCACGC GCTTCGTGCT CACCTTCATG CGCGACAGGA CACAGGAGAC GCCGCAGCCA TGA
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Protein sequence | MSTSTATARA SPDALLALAG KEGRGRLKIF VGAAPGVGKT YAMLSAARSE RDGGRDVVAG LIETHGRLET EHLLQGIEVL SRHPIVYRNR VMREFDLDGA LARKPSLLLV DEYAHTNVPG SRHPKRWQDI DELLAAGIDV WTTLNIQHLE SLNDVVLKIS KIRVRETVPD KAFDRADEIV LVDLPPDELL KRLAQGKVYV QDTAARAVES FFKPQNLTAL RELAMRRAAE RVDAALVERM QAHAIEGPWA AGERILACVG PDTGSPGVVR TAKRLADLMD APWIAVTVER SGVNPDSAAR RQIDEALKLA ESLGAETHTL TGNDIPDELL RFARFENVTQ MVIGRARGGA LRQWLAGSLP QQLMQRSTDI AIHLVPVQGE PAERDSRSLA ARLNASKPAH FVYATVAVAG AVAVGKAFAQ AIPTASLSVV FLMAVLFSAV KSGVGPAIFA SVLSFFTYNF FFIAPLYTFT VAEPYELLAL LMYLVVAIVA ATLAGRLRDQ ARISAGRVRA MRRLYEFTRR LSGLATSDDI AEGAASEIHA SLGRPVMVML PREDDLVLAA AWPPEDALDE AAMMAARWAF THNEPAGFDT GTLPIVPWRF LPVRTGATTY GVIGVMQKKD SAALDSEAQA LLDTLTEQTA AALERAALTR DMVRARTATE TERVRNTLLA SISHDFRTPL SSILGSATSL STFGDKLDDA ATRDLLANIR EEAEGLDEMV RNLLSITRIE SGALELRRDW VDLREIAARV IEAARRRGAA QHIDLDCPAD SPLVRADAAL VEQALGNIVA NAVAHTPPTS HILIDAENDA SSVKLRVTDD GPGVAVADLP RIFDRFVRSA SGTAPSSSRG QGVGLGLAIA KGIMEAHGGA VSALSPVANG HGTRFVLTFM RDRTQETPQP
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