Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4637 |
Symbol | |
ID | 3912454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5241547 |
End bp | 5242389 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637886541 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_488231 |
Protein GI | 86751735 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGGC TGAACGGCAA GGTCGCGGTG ATCACCGGCG CGACCAGCGG GATTGGTCTG CGCACGGCCG AGGTCTTCGT CGCCGAGGGT GCTCACGTCG TGATCGCCGG CCGGCGTGCC CCGGAGGGAG AGGCGCTGGC GGCAAAGCTC GGGCCGTCCT GCATTTTCAG GCAGACCGAC GTCACCGCAG AGGATCAGAT GAAGGCGCTG ATCGGCCAGG CGATCGACTC CTTCGGCCGG ATCGATTGCC TGTTCAACAA TGCCGGCGGC CCGGCGCAGA CCGGCGGCAT CGAAGGCCTC GAGGCCGACC GGTTCGATGC TGCGATGGCG ACGCTGGTGC GCAGCGTGAT GCTCGGCATG AAGCATGCCG CGCCGCACAT GAAGAAACAG GGCTCGGGCT CGATCATCAA CAACGGCAGC ATCGCCGGCC GGCTCGCCGG CTTCTCGTCA TCGCTGGTGT ACGGCGCCGC CAAGGCGGCG GTGATCCATC TCACAAAATG CGTCGCGATG GAGCTCGGCG AGTCCGGCGT CCGGGTCAAT TCGATCTCGC CCGGTGCGAT CGCGACCGGC ATCTTCGGCA AGGCGCTCGG CCTGACCACC GAGGCCGCGG AGAAAACCTC GGCGACGATG CGCGAAATCT ACAAGACCGC GCAGCCGATC CAGCGTGCAG GACTACCCGA AGACATCGCG CACGCCGCGG TGTTTCTCGC CAGCGACGAG TCGGGCTTCA TCAACGGCCA CGACCTGGTG ATCGACGGCG GCATCACCGG CGGCCGCAAC TGGACGCAGC AACAGCAGGG CTACGTCGCG CTGCGCAAGG CGTTCGATCA CGGCGAGGGG TGA
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Protein sequence | MGRLNGKVAV ITGATSGIGL RTAEVFVAEG AHVVIAGRRA PEGEALAAKL GPSCIFRQTD VTAEDQMKAL IGQAIDSFGR IDCLFNNAGG PAQTGGIEGL EADRFDAAMA TLVRSVMLGM KHAAPHMKKQ GSGSIINNGS IAGRLAGFSS SLVYGAAKAA VIHLTKCVAM ELGESGVRVN SISPGAIATG IFGKALGLTT EAAEKTSATM REIYKTAQPI QRAGLPEDIA HAAVFLASDE SGFINGHDLV IDGGITGGRN WTQQQQGYVA LRKAFDHGEG
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