Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4615 |
Symbol | |
ID | 3912432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5215301 |
End bp | 5216650 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637886519 |
Product | outer membrane protein |
Protein accession | YP_488209 |
Protein GI | 86751713 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TTCTCGTCGG CGTCGCGCTC ATTGGCTCAG CCGTCAGCGC CCAGGCGGCC GATCTTGCCG TCAAAGCCCC GTACCTCAAG GCGCCGATCG CGGCCGTCTA TGACTGGACC GGCTTCTACA TCGGCGCGAA CGTCGGCGTC GGCCTCGGTC GTGACCTTCA GACCCATGCC GTCCCGGCGG GCGGCGTTGC CTCGCACCTG TCGCCCCAGG GGGTGATCGG CGGCGGTCAG ATCGGCTACA ACTGGCAGTC CAATACCACC TTCCTCGGTC CGTTGCTGAT CGGCGTCGAA GCCGACATCC AGGGCAGCGG TATGACCGAC GGCCATACCA CCCTGAGCAG CCCGCTCGGC GCGGCCAACT ACAATCAGAA GCTGGACTGG TTCACCACCG TGCGCGGCCG CGTGGGCTTG GTGCGCGGCC CGGTGGTCGG CTACTTCACT GGCGGTTTCG CCGCCGCCAA CGTCAAGACC ACCGTTACCC AGATCGGCGG CATCGTGCCG TTCGCCTTCA GCGAGACCCG CACCGGTTGG ACCATCGGCT CCGGCGTCGA AGCGGCGATC GGCGGCAACT GGACCGGCAA GATTGAATAT CTGTATCTCG ACCTCGGCAA CCGCAACGAC GTGTTCGGCA CCCAGGCGCT GCGCACCGAA TATCGCGAGA GCATCTTCCG CGTCGGCCTC AACTATCGCA TCGGCGGCAA CGGCATGTAC ATCACGCCGC CCCCGGCGAA CTGGGCCGGC CTGTATCTCG GCGGCAATTT CGGCGGCGCC ACCGCGCGCA ACCGGACGAC CTCGTCGGTG ATCTTTAGCG AGAACTTCAA CCTCTCGCCG GACGGCTTCG TCGGCGGCGG TCAGATCGGC TACAACTGGC AGGCTTCGAA CTGGGTGTTC GGTGCGGAGG CCGACTTCCA AGGCTCGACC CAGAAGGATG ACCGGGCCGC GGTGTTAAGT TCGCTCCTCC TTTACAACCA GAAGCTTCCC TGGTTCGGCA CCGCCCGCGC CCGCCTCGGC TACACGGTCG GCTCGACCCT GTTCTACGCC ACCGGCGGTT ACGCTTACGG CAACGTCAAG ACCAACGTCG TGACCGCGTT CAGCAACGAG ACCTTCAACC GCTCGCGCAG CGGCTATGCG GTCGGCGCCG GCGTCGAGAC GCCGTTCCAG CTGTTCGGCC TGCTCGGCCC GAACTGGACC TCGAAGACCG AATATCTCTA CGTCGACCTC GGCTCGACCA CCGACTCGTT CTTGGGCGGC GCAGCCGTGA GCACCTCCAA GGTGACCAAT CACATGCTCC GCACCGGCAT CAACTATCAC TTCAACCAGC CGGTTGTTGC GAAGTACTAA
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Protein sequence | MKKILVGVAL IGSAVSAQAA DLAVKAPYLK APIAAVYDWT GFYIGANVGV GLGRDLQTHA VPAGGVASHL SPQGVIGGGQ IGYNWQSNTT FLGPLLIGVE ADIQGSGMTD GHTTLSSPLG AANYNQKLDW FTTVRGRVGL VRGPVVGYFT GGFAAANVKT TVTQIGGIVP FAFSETRTGW TIGSGVEAAI GGNWTGKIEY LYLDLGNRND VFGTQALRTE YRESIFRVGL NYRIGGNGMY ITPPPANWAG LYLGGNFGGA TARNRTTSSV IFSENFNLSP DGFVGGGQIG YNWQASNWVF GAEADFQGST QKDDRAAVLS SLLLYNQKLP WFGTARARLG YTVGSTLFYA TGGYAYGNVK TNVVTAFSNE TFNRSRSGYA VGAGVETPFQ LFGLLGPNWT SKTEYLYVDL GSTTDSFLGG AAVSTSKVTN HMLRTGINYH FNQPVVAKY
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