Gene RPB_4615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4615 
Symbol 
ID3912432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5215301 
End bp5216650 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content65% 
IMG OID637886519 
Productouter membrane protein 
Protein accessionYP_488209 
Protein GI86751713 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TTCTCGTCGG CGTCGCGCTC ATTGGCTCAG CCGTCAGCGC CCAGGCGGCC 
GATCTTGCCG TCAAAGCCCC GTACCTCAAG GCGCCGATCG CGGCCGTCTA TGACTGGACC
GGCTTCTACA TCGGCGCGAA CGTCGGCGTC GGCCTCGGTC GTGACCTTCA GACCCATGCC
GTCCCGGCGG GCGGCGTTGC CTCGCACCTG TCGCCCCAGG GGGTGATCGG CGGCGGTCAG
ATCGGCTACA ACTGGCAGTC CAATACCACC TTCCTCGGTC CGTTGCTGAT CGGCGTCGAA
GCCGACATCC AGGGCAGCGG TATGACCGAC GGCCATACCA CCCTGAGCAG CCCGCTCGGC
GCGGCCAACT ACAATCAGAA GCTGGACTGG TTCACCACCG TGCGCGGCCG CGTGGGCTTG
GTGCGCGGCC CGGTGGTCGG CTACTTCACT GGCGGTTTCG CCGCCGCCAA CGTCAAGACC
ACCGTTACCC AGATCGGCGG CATCGTGCCG TTCGCCTTCA GCGAGACCCG CACCGGTTGG
ACCATCGGCT CCGGCGTCGA AGCGGCGATC GGCGGCAACT GGACCGGCAA GATTGAATAT
CTGTATCTCG ACCTCGGCAA CCGCAACGAC GTGTTCGGCA CCCAGGCGCT GCGCACCGAA
TATCGCGAGA GCATCTTCCG CGTCGGCCTC AACTATCGCA TCGGCGGCAA CGGCATGTAC
ATCACGCCGC CCCCGGCGAA CTGGGCCGGC CTGTATCTCG GCGGCAATTT CGGCGGCGCC
ACCGCGCGCA ACCGGACGAC CTCGTCGGTG ATCTTTAGCG AGAACTTCAA CCTCTCGCCG
GACGGCTTCG TCGGCGGCGG TCAGATCGGC TACAACTGGC AGGCTTCGAA CTGGGTGTTC
GGTGCGGAGG CCGACTTCCA AGGCTCGACC CAGAAGGATG ACCGGGCCGC GGTGTTAAGT
TCGCTCCTCC TTTACAACCA GAAGCTTCCC TGGTTCGGCA CCGCCCGCGC CCGCCTCGGC
TACACGGTCG GCTCGACCCT GTTCTACGCC ACCGGCGGTT ACGCTTACGG CAACGTCAAG
ACCAACGTCG TGACCGCGTT CAGCAACGAG ACCTTCAACC GCTCGCGCAG CGGCTATGCG
GTCGGCGCCG GCGTCGAGAC GCCGTTCCAG CTGTTCGGCC TGCTCGGCCC GAACTGGACC
TCGAAGACCG AATATCTCTA CGTCGACCTC GGCTCGACCA CCGACTCGTT CTTGGGCGGC
GCAGCCGTGA GCACCTCCAA GGTGACCAAT CACATGCTCC GCACCGGCAT CAACTATCAC
TTCAACCAGC CGGTTGTTGC GAAGTACTAA
 
Protein sequence
MKKILVGVAL IGSAVSAQAA DLAVKAPYLK APIAAVYDWT GFYIGANVGV GLGRDLQTHA 
VPAGGVASHL SPQGVIGGGQ IGYNWQSNTT FLGPLLIGVE ADIQGSGMTD GHTTLSSPLG
AANYNQKLDW FTTVRGRVGL VRGPVVGYFT GGFAAANVKT TVTQIGGIVP FAFSETRTGW
TIGSGVEAAI GGNWTGKIEY LYLDLGNRND VFGTQALRTE YRESIFRVGL NYRIGGNGMY
ITPPPANWAG LYLGGNFGGA TARNRTTSSV IFSENFNLSP DGFVGGGQIG YNWQASNWVF
GAEADFQGST QKDDRAAVLS SLLLYNQKLP WFGTARARLG YTVGSTLFYA TGGYAYGNVK
TNVVTAFSNE TFNRSRSGYA VGAGVETPFQ LFGLLGPNWT SKTEYLYVDL GSTTDSFLGG
AAVSTSKVTN HMLRTGINYH FNQPVVAKY