Gene RPB_4608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4608 
Symbol 
ID3912425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5203951 
End bp5204499 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content66% 
IMG OID637886512 
ProductTetR family transcriptional regulator 
Protein accessionYP_488202 
Protein GI86751706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.582977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAG ATACCAAGGA CCGGCTGACA CGTTCGGACT GGCTCGCGCA CGGGCTGCGG 
ACGCTGGCCA GGCACGGGGC GAATGCCCTC AAGGTCGGCG ATCTCGCGGC CGGGCTGGAG
GTGTCGCGGG GCAGTTTCTA CTGGCACTTC AGGGACGCCA CCGATTTCCG CCTGCAACTC
CTGCAGCTCT GGCAGGAGCG AGCGACCGAC CAGGTGTTTC GCGACATCGA CGCCGCCATC
GTCGGGCCGG CGCGGCTGAC GCATCTGATG AAGCTCGCCT TCAACGAGGA CCGAAGCCTC
GACCGGGCGA TCCGCGAGCT TGCGGCGACC GATCCCACTG CGGCGGCGAT GGTCGCCTCG
GTGGATGCCC GGCGCATCGA CTATCTGTCG AAGCTCATGA TCGAGTCGGG CGTCGAAGGC
CGGCGCGCGC TACCGCGGGC CGAATTTCTG TACTGGGCCT ATATCGGTCA GACCGCGGTG
CTGAACCCGG CCCACACCGT CGTGACGGAA TCGGATATCG ACGATTTGAG CGCCCTGTTC
ACCCGATAG
 
Protein sequence
MDSDTKDRLT RSDWLAHGLR TLARHGANAL KVGDLAAGLE VSRGSFYWHF RDATDFRLQL 
LQLWQERATD QVFRDIDAAI VGPARLTHLM KLAFNEDRSL DRAIRELAAT DPTAAAMVAS
VDARRIDYLS KLMIESGVEG RRALPRAEFL YWAYIGQTAV LNPAHTVVTE SDIDDLSALF
TR