| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4606 |
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| Symbol | |
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| ID | 3912423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5201391 |
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| End bp | 5203181 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637886510 |
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| Product | Acyl-CoA dehydrogenase-like |
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| Protein accession | YP_488200 |
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| Protein GI | 86751704 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.504166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCT ACAAGGCTCC GGTTGAAGAT GTCAGCTTCC TGCTGAACAA CGTGTTTCAC
TTCGACAAGT ACAACAACCT GCCCGGCTTC GCGGACGCGG CACCCGACGT GCGCGACGCG
ATCATCAACG AGGCGGCGCG GCTCTCCGAG CAGGTGCTGG CGCCGCTGAA TGCGGTCGGC
GACCGCGAGG GCTGCGTCCG CCACGACGAC GGCAGCGTCA CGACGCCGAA GGGCTTCAAG
GAAGCCTACA AGCAGATCGC CGAAGGCGGC TGGCTCGGCC TGTCGTCGCC GCCGGAATTC
GGCGGCCAGG GCCTGCCGGT GACGCTGACG CAGACCGTCG CCGAATTCCA GATCTCCGCC
AACATGGCGT TCTCGATGTA TCACGGCCTG ACCATGGGCG CCGCCGCGGC GCTGCTGGTC
CACGGCAATG CCGAGCAGAA GGCGCTGTAT CTGCCGAAGA TGACCGCCGG CGAGTGGACC
GGCACCATGA ACCTGACCGA GCCGCAATGC GGCACCGATC TCGGACTGCT GCGCACCAAG
GCGGTGAAGC AGGCCGACGG CAGCTACAAG ATCACCGGCA CCAAGATCTT CATCTCCGCC
GGCGAGCACG ACCTGTCAGA GAACATCATC CATTTGGTGC TGGCACGGAT CGAAGGCGCG
CCCGCCGGGA TCAAGGGCGT GTCGCTGTTC GTGGTGCCGA AGATCCTGGT CAATGCCGAT
GGTTCGCTCG GCGCCCGCAA CGGCGTGATG TGCGGCTCGA TCGAGCACAA GATGGGCATC
CACGGCAACG CCACTTGCAC AATGAACTAC GACGATGCCA CCGGCTGGCT GATCGGCGAA
GAAAACAAGG GCATGCAGGG CATGTTCGTG ATGATGAACG AGGCTCGCCT CGGCGTCGCC
GTGCAGGGCC TCGCGCAGTC CGAGGTCGCG TATCAGAACG CGGTGGCCTA TGCGCGCGAG
CGTCTGCAGG GCCGTGCGCT GTCGGGACCG AAGGCGACCG ACAAGCCGGC CGATCCGATC
ATCGTGCATC CGGACGTGCG CCGCGTGCTG CTCACCATCC GCGCCTTCAA CGAGGCGGCG
CGCGCGCTGG TGATGTGGAC GGCGCTGAAG AGCGACGTCG CGCACCGTTC CGACGACGCC
AAGGAGCGGC AGATCGCCGA CGATCATCTC GGCCTGATGA CGCCGGTTCT GAAGGGCGTG
CTGACCGACG TCGGCTTCTC CAACGCGGTG CTGGCGCAGC AGGTCTATGG CGGCCACGGC
TACATCGCCG CCAACGGCAT GGAGCAGTTC GTCCGCGATG CCCGCATCGC GATGATCTAC
GAGGGCGCCA ACGGCATTCA GGCGCTGGAT CTCGTCGGCC GCAAATTGCC GCGCGACGGC
GGCCGCGCGG TGATGGCGTT CTTCGCCGAG GTCGGCGCCT TCGCCAAGGA GCACGGCGGC
GACGAGGCGA TGAAGCCGTT CGTCACGCCG CTGTCGACCT CGCTCAGCCA TCTGCAGCAG
GCCACCACCT GGCTGATGCT GAACGCGATG GCGGCGCCCG ACAATGCCGG CGCCGGCGCC
ACCGATTACA TGCAGCTGTT CGGCCTGGTG GCCTGCGGCT ACATGTGGGC GAAGATGGCC
AAGGTGGCAC AGGACAAGAT TGCCGCCGAC GGCGCCACGC CCTATCTGAC CACCAAGCTC
GTCACCGGCC GGTTTTTTGC CGAGCGAACC CTGCCGGGCA CCGCGCTGCA TCTCGCGCGA
ATCCAGGCCG GCAGCGGTAC GGTGATGGAA TTGCCGGCGG AAGCGTTCTG A
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| Protein sequence | MTIYKAPVED VSFLLNNVFH FDKYNNLPGF ADAAPDVRDA IINEAARLSE QVLAPLNAVG
DREGCVRHDD GSVTTPKGFK EAYKQIAEGG WLGLSSPPEF GGQGLPVTLT QTVAEFQISA
NMAFSMYHGL TMGAAAALLV HGNAEQKALY LPKMTAGEWT GTMNLTEPQC GTDLGLLRTK
AVKQADGSYK ITGTKIFISA GEHDLSENII HLVLARIEGA PAGIKGVSLF VVPKILVNAD
GSLGARNGVM CGSIEHKMGI HGNATCTMNY DDATGWLIGE ENKGMQGMFV MMNEARLGVA
VQGLAQSEVA YQNAVAYARE RLQGRALSGP KATDKPADPI IVHPDVRRVL LTIRAFNEAA
RALVMWTALK SDVAHRSDDA KERQIADDHL GLMTPVLKGV LTDVGFSNAV LAQQVYGGHG
YIAANGMEQF VRDARIAMIY EGANGIQALD LVGRKLPRDG GRAVMAFFAE VGAFAKEHGG
DEAMKPFVTP LSTSLSHLQQ ATTWLMLNAM AAPDNAGAGA TDYMQLFGLV ACGYMWAKMA
KVAQDKIAAD GATPYLTTKL VTGRFFAERT LPGTALHLAR IQAGSGTVME LPAEAF
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